DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL13 and AT3G07110

DIOPT Version :10

Sequence 1:NP_523598.2 Gene:mRpL13 / 35145 FlyBaseID:FBgn0032720 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001030654.1 Gene:AT3G07110 / 819897 AraportID:AT3G07110 Length:207 Species:Arabidopsis thaliana


Alignment Length:170 Identity:31/170 - (18%)
Similarity:61/170 - (35%) Gaps:66/170 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 HLLG-----LQKPIYHPMNDCGDHVVLINTREIALPGD---EWVKRVYF----HHTGYPGGASWT 89
            |:||     :.|.:.:     |.::|::...||.|.|.   :.:|.:.|    .:|....|    
plant    19 HMLGRLASVVAKDLLN-----GQNIVVVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHG---- 74

  Fly    90 LAWQLHEKDPTMVMKKAVYNSMRGNLQRR-----HTMQRLHLFADDQVPEEILQNVTNQIRTPRS 149
               .:|.:.|:    |..:.::||.:..:     :.:.||.:|.....|.:.::.:.        
plant    75 ---PIHFRAPS----KIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKIKRMV-------- 124

  Fly   150 IPQRL-----------------------DHID--KETLEN 164
            :|..|                       :|.|  |:.|||
plant   125 VPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKQELEN 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL13NP_523598.2 Ribosomal_L13 15..133 CDD:459856 22/112 (20%)
AT3G07110NP_001030654.1 PTZ00068 10..195 CDD:240253 31/170 (18%)

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