DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL13 and rpl13a

DIOPT Version :10

Sequence 1:NP_523598.2 Gene:mRpL13 / 35145 FlyBaseID:FBgn0032720 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_997949.1 Gene:rpl13a / 560828 ZFINID:ZDB-GENE-030131-168 Length:205 Species:Danio rerio


Alignment Length:108 Identity:21/108 - (19%)
Similarity:41/108 - (37%) Gaps:23/108 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 HLLGLQKPIYHPMNDCGDHVVLINTREIALPGDEWVKRVYF------HHTGYPGGASWTLAWQLH 95
            ||||....|.......|..:|::....|.:.|:.:..::.:      .....|...|:      |
Zfish    16 HLLGRLSAIVAKQVLLGHKIVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGSY------H 74

  Fly    96 EKDPTMVMKKAVYNSMRGNLQRR-----HTMQRLHLFADDQVP 133
            .:.|:.:.    :.::||.|..:     ..:.||.:|  |.:|
Zfish    75 FRAPSRIF----WRTVRGMLPHKTKRGQAALDRLKVF--DGIP 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL13NP_523598.2 Ribosomal_L13 15..133 CDD:459856 20/106 (19%)
rpl13aNP_997949.1 PTZ00068 5..202 CDD:240253 21/108 (19%)

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