DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL13 and mrpl13

DIOPT Version :10

Sequence 1:NP_523598.2 Gene:mRpL13 / 35145 FlyBaseID:FBgn0032720 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001018370.1 Gene:mrpl13 / 553555 ZFINID:ZDB-GENE-050522-167 Length:179 Species:Danio rerio


Alignment Length:177 Identity:82/177 - (46%)
Similarity:115/177 - (64%) Gaps:0/177 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SIAKRVQQWATFARTWHIYDCTWQNPFESAKLVKTHLLGLQKPIYHPMNDCGDHVVLINTREIAL 66
            |.::..||||||||:|.:.|...|.|.:.|.:....|.|..||||||::|.|||||::||:.||.
Zfish     3 SFSRSAQQWATFARSWFLIDARMQPPGKIASMCAVRLQGKHKPIYHPLSDIGDHVVVMNTKHIAF 67

  Fly    67 PGDEWVKRVYFHHTGYPGGASWTLAWQLHEKDPTMVMKKAVYNSMRGNLQRRHTMQRLHLFADDQ 131
            .|::|.::||..|||:||......|.|||.||.|.::|.|||..:..||.||..|||||||.||.
Zfish    68 SGNKWEQKVYSSHTGHPGSFKQVTAAQLHRKDSTAIIKLAVYGMLPRNLTRRTMMQRLHLFPDDV 132

  Fly   132 VPEEILQNVTNQIRTPRSIPQRLDHIDKETLENFPNIMDYPKDYILR 178
            :||:||:|:|.::..||.||::|....:|..:.||.:...|:||.::
Zfish   133 LPEDILKNLTEELPQPREIPRKLSEYTQEERDAFPRLWTPPEDYRMK 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL13NP_523598.2 Ribosomal_L13 15..133 CDD:459856 57/117 (49%)
mrpl13NP_001018370.1 Ribosomal_L13 18..131 CDD:238230 54/112 (48%)

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