DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL13 and mrpl-13

DIOPT Version :10

Sequence 1:NP_523598.2 Gene:mRpL13 / 35145 FlyBaseID:FBgn0032720 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_492067.1 Gene:mrpl-13 / 172479 WormBaseID:WBGene00008769 Length:205 Species:Caenorhabditis elegans


Alignment Length:172 Identity:61/172 - (35%)
Similarity:97/172 - (56%) Gaps:0/172 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RVQQWATFARTWHIYDCTWQNPFESAKLVKTHLLGLQKPIYHPMNDCGDHVVLINTREIALPGDE 70
            ||.||..|:|.||:.|...|:.......|..:|.|..|||:||..|||||||:.|.::||:...:
 Worm    12 RVNQWLQFSRQWHVIDANQQDAELLGDKVARYLAGKHKPIFHPETDCGDHVVVTNCKDIAMHAFD 76

  Fly    71 WVKRVYFHHTGYPGGASWTLAWQLHEKDPTMVMKKAVYNSMRGNLQRRHTMQRLHLFADDQVPEE 135
            |...:|..:..||...:...|||:|:.|...:...:||.|:..||.||..:||||||.|:::.|.
 Worm    77 WKHTIYKFNMEYPKSKADIPAWQIHDYDQCRIAFLSVYRSLGNNLLRRRHIQRLHLFPDEEMAEF 141

  Fly   136 ILQNVTNQIRTPRSIPQRLDHIDKETLENFPNIMDYPKDYIL 177
            :.:|:.:|:|..:.:.:|.|....|...|||.::.:...:::
 Worm   142 VRKNIGSQLRQVQGVVKRSDEYTAEERANFPRVVKFADKHVV 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL13NP_523598.2 Ribosomal_L13 15..133 CDD:459856 46/117 (39%)
mrpl-13NP_492067.1 Ribosomal_L13 23..136 CDD:238230 44/112 (39%)

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