DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10600 and Rsbn1l

DIOPT Version :9

Sequence 1:NP_001137839.1 Gene:CG10600 / 35142 FlyBaseID:FBgn0032717 Length:1406 Species:Drosophila melanogaster
Sequence 2:NP_001129344.1 Gene:Rsbn1l / 311987 RGDID:1308748 Length:824 Species:Rattus norvegicus


Alignment Length:989 Identity:305/989 - (30%)
Similarity:466/989 - (47%) Gaps:251/989 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ARGNASPTTTSAQREATTTITPVEPTAAATTTNGNTLPTQQQQQLQSGDGNANNPTTNARIMLAA 126
            |||   |....:::||...:.| ....:..:.:...:.|::::..:..:|..::.....::...|
  Rat     8 ARG---PVAVLSEKEAFGKLQP-SSRESPGSMSAKKVRTEEKKGPRRVNGEGDSGGNGGQLQPPA 68

  Fly   127 AEEEQAVASSVATTAGAPTAATTTATTT---ALADTTKTSTSTDEKTGKVKRN----SQNTNPMS 184
            |...|:..|..|.:..|..||::.||..   |.:.:...|:::...:..|.|.    |...:...
  Rat    69 APSPQSYGSPAAWSFAARPAASSQATPRGCYAFSASPSVSSASASSSQPVPRKLLVASSLLHAQP 133

  Fly   185 TNVICTPTHSPTPPTEERNHKRKKRDRERDEDKNR-------RSNNHNSSSKDRDKDRDRDKERD 242
            ..|:..|.   |||...:..:.|::   |:::|.|       |..|..:....|||.:|:.||:|
  Rat   134 HRVLLPPV---TPPAAAKPRRPKEK---REKEKRRHGLGGADRDENGEAKPLPRDKIKDKIKEKD 192

  Fly   243 KERDRERERDRNRESSSKSSKEAEHKSSSSRSKEKYHRSDRDREREKERDREKIPSSSSSSSSHS 307
            ||::|||::.:......|.:.:.:....|.:.|.|.:..|...::.|::.::|       ...:.
  Rat   193 KEKERERKKHKVMSEIKKENGDVKIFLKSGKEKPKTNIEDLQIKKVKKKKKKK-------HKENE 250

  Fly   308 NRRRSSDSSRSSQNSSFKSKDPGADPVLPQAVVAALEKQIKVEEVIKKEPVETKQEVDTEPTPVL 372
            .|:|....|:|.|.                                                 :.
  Rat   251 KRKRPKMYSKSIQT-------------------------------------------------IC 266

  Fly   373 SNLIKTEAEIKTESTEKPNKPLVNGEAIAKTRDEVSRQL---NFGDKVSNSKLMPSPAPKSSSGS 434
            |.|:..|        ::..|.::|.    ..:|.:.:.|   |...||.::...|..:.|.....
  Rat   267 SGLLSAE--------DQEAKGILND----NVKDCIGKHLDTKNCDSKVPDNSDFPFVSLKEPRVQ 319

  Fly   435 NSTASNHSSSQSSSSRKSYLSSSSSSSSSNHHKSSSSSSSRHSSSTSRECSKCYKRSKIRRTSVG 499
            |.                                                        ::|    
  Rat   320 ND--------------------------------------------------------LKR---- 324

  Fly   500 VQCLQHAPATGPWQTVQSLPPRPNRKPPAGLENLKYGCYFQVEQYPNGGASIVHLYQHEIDALSP 564
                                          |:.|::.....||..||||||::|.|..|:..|||
  Rat   325 ------------------------------LDTLEFKQLIHVEHQPNGGASVIHAYCSELSCLSP 359

  Fly   565 DEMEELVDEFFEVCFAEDEQGYAHHVMGIVHDAARYLPDLLEHMAENYSTLTVKAGVLGRNSDIE 629
            .||....:||..:.|:|:|...|.:|||:||.||.||||.|::.:.|:....||..:||: .|||
  Rat   360 VEMRRFAEEFVGLAFSENESSAAFYVMGVVHGAATYLPDFLDYFSYNFPNSPVKMEILGK-KDIE 423

  Fly   630 TCTMSQYNEQVVRNYCQGTFRYGPLHQISLVGKVHEEVGGYFPDLLGRIEMNPFLRKTMPWACNS 694
            |.|||.::.||.|.|..||:|.||:.||||||.|.||||.|||:.|..:|.:|||:.|:||...|
  Rat   424 TTTMSNFHAQVKRTYSHGTYRAGPMRQISLVGAVDEEVGDYFPEFLDMLEESPFLKCTLPWGTLS 488

  Fly   695 ILQTDPRQ-SNDGPILWIRAGEQLVPTAELNSKTPLKRQRTRINELRNLQYLPRLSEARETMIED 758
            .|:.:.|: |:||||:|:|.|||::|.|:: .|:|.||:|| .||::|||||||.||.||.:.||
  Rat   489 SLKLESRKDSDDGPIMWVRPGEQMIPVADM-PKSPFKRKRT-TNEIKNLQYLPRTSEPREMLFED 551

  Fly   759 RTKAHADHVGHGHERITTAAVGILKAVHCGQTYSQNRITKDVVAFAAQDFNTMVEMLQLDLHEPP 823
            ||:|||||:|.|.||.||||||:||||||||...|.|:||||:.|.|:||..:|:.:||||||||
  Rat   552 RTRAHADHIGQGFERQTTAAVGVLKAVHCGQRPDQPRVTKDVICFHAEDFLEVVQRMQLDLHEPP 616

  Fly   824 ISQCVQWIEDAKLNQLRREGVRYARIQLCDNDIYFLPRNIIHQFRTVTAVTSVAWHLRLRQYY-- 886
            :||||||::|||||||||||:|||||||.||||||:|||::|||:||:||.|:|||:||:.|:  
  Rat   617 LSQCVQWVDDAKLNQLRREGIRYARIQLYDNDIYFIPRNVVHQFKTVSAVCSLAWHVRLKLYHAE 681

  Fly   887 ----------------PGQEVI------NEKNNPVLA-------ETPHYKEKQTILPN----PIS 918
                            |...|:      ...::|||:       |:|..|::..:..|    |::
  Rat   682 DTCHSTVTHEQGIPSGPTSSVLGTHTENQSSSDPVLSDRLHSKYESPQVKQEPVVSLNIKEEPVT 746

  Fly   919 HDECGK-KTPSKRAHDGRTKKKL----------IDLDGKERRSSESSIDEHPAAGS--------- 963
            .....| :||:..  :|::.|..          ||:|.|...::: .:.|....||         
  Rat   747 VTVSAKTRTPNNT--EGKSSKAKSDHVQFSDFHIDMDSKFENTNK-DLKEDLCPGSVQEVDTRQH 808

  Fly   964 ----SSPSQNQENN 973
                |:..::.|||
  Rat   809 SCIPSNQDRSDENN 822



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352228
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4425
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004037
OrthoInspector 1 1.000 - - otm44953
orthoMCL 1 0.900 - - OOG6_105705
Panther 1 1.100 - - O PTHR13354
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2780
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.700

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