DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ham and ZNF254

DIOPT Version :9

Sequence 1:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster
Sequence 2:NP_975011.3 Gene:ZNF254 / 9534 HGNCID:13047 Length:659 Species:Homo sapiens


Alignment Length:741 Identity:154/741 - (20%)
Similarity:247/741 - (33%) Gaps:273/741 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 SGDEFSKDKKNSSLIREGDIDFTDDENGFDIRCEVCDKVYPDLDLLDDHLIGAHHFKQDEFPCKQ 373
            |.||:..:|:..:.:.:   .||..::.. .:|:...||:  ...|:.:.....|.::..|.||:
Human   128 SVDEYKVNKEGYNGLNQ---CFTTAQSKV-FQCDKYLKVF--YKFLNSNRPKIRHTEKKSFKCKK 186

  Fly   374 CALRFCHRPLLIKHEAISHNNIRKYSCENCSKVFCDPSNLQRHIRAY------------------ 420
            ....||......:|::|.|.. :.|.|:.|.|.|...|.|..|.:.|                  
Human   187 RVKLFCMLSHKTQHKSIYHRE-KSYKCKECGKTFNWSSTLTNHRKIYTEEKPYKCEEYNKSPKQL 250

  Fly   421 ---------HVGARCHPCPECGKTFGTSSGLKQHQHIHSSVKPFACEVCSKAYTQFSNLCRHKRM 476
                     |.|.:.:.|.|||:.|..||.|..|:.||:..||:.||.|.||:...|.|..||::
Human   251 STLTTHEIIHAGEKLYKCEECGEAFNRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLTEHKKI 315

  Fly   477 HATCRMQIKCDKCNQSFSTLTSLTKHKKFCDSTGPGPYRNQHVNRHHQHPHQHPLPHQPHLAATA 541
            | |.:...||::|.::|...::||:||:.  .||..||:                          
Human   316 H-TRKKPYKCEECGKAFIWSSTLTRHKRM--HTGEKPYK-------------------------- 351

  Fly   542 TSTCPAPPRESSESSSSAAAAAVAAMSTPPNPFLMFRTAPSFFPGFPPYGFPPFLPQNPLHPTNI 606
               |....:..|:||:                                      |..:.:..|. 
Human   352 ---CEECGKAFSQSST--------------------------------------LTTHKIIHTG- 374

  Fly   607 PMFFSKNPMDLGCGGPEITSPVSAFDQKLPFGFLKGENSESQAYDKVTEKELVFKAEEKLKKEPL 671
                .|....|.||        .||.|                ...:|..:::...|:..|.|..
Human   375 ----EKRYKCLECG--------KAFKQ----------------LSTLTTHKIIHVGEKLYKCEEC 411

  Fly   672 VQAFEGEEDESRSSLDIKGKLEDTRNDSKSEEQDDMKQEPERVSTPDQQQAEDDRKSIDIMSTPP 736
            .:.|      :|||.....|:..|                                         
Human   412 GKGF------NRSSNLTTHKIIHT----------------------------------------- 429

  Fly   737 PADTPSGGDGPLDLSICRKRSAGSFFTAPAEDNLMLHRFMPRLHEFEAERGQPLKMRKSHS---- 797
                   |:.|.....|.|....|       ..|..|:   |:|    .|.:|.|..:...    
Human   430 -------GEKPYKCEECGKAFIWS-------STLTKHK---RIH----TREKPYKCEECGKAFIW 473

  Fly   798 SAESSTSQKSHKGSSPTPTPTASPGLTPSPSPPTSAGGELSSTSEGGAVPTMAAAAFAADHSALA 862
            |:..:..::.|.|..|...              ...|...|.:|                     
Human   474 SSTLTRHKRMHTGEKPYKC--------------EECGKSFSQSS--------------------- 503

  Fly   863 SGPTLPQTHPTFHPLLLEEIYRSGFPFLCQPGGRRGIEALLAGAASAAAPKRPLPPVKFSAGSVV 927
               ||     |.|.:    |:....|:.|:..|:       |...|:...|..:           
Human   504 ---TL-----TTHKI----IHTGEKPYKCEECGK-------AFNWSSTLTKHKI----------- 538

  Fly   928 GLKTKDR-YSCKFCGKVFPRSANLTRHLRTHTGEQPYPCKYCDRAFSISSNLQRHVRNIHNKERP 991
             :.|::: |.|:.|||.|.:|:.||.|.|.||||:||.|:.|.::|:.||...:| :.||...:|
Human   539 -IHTEEKPYKCEKCGKAFKQSSILTNHKRIHTGEKPYKCEECGKSFNRSSTFTKH-KVIHTGVKP 601

  Fly   992 FRCELCDRSFGQQTNLDRHVKKHESE 1017
            ::||.|.::|...:.|.:|.:.|..|
Human   602 YKCEECGKAFFWSSTLTKHKRIHTGE 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978
C2H2 Zn finger 341..363 CDD:275368 4/21 (19%)
C2H2 Zn finger 371..392 CDD:275368 6/20 (30%)
SFP1 <391..479 CDD:227516 35/114 (31%)
C2H2 Zn finger 400..421 CDD:275368 8/47 (17%)
SUF4-like 403..>445 CDD:411020 17/68 (25%)
C2H2 Zn finger 403..421 CDD:411020 7/44 (16%)
C2H2 Zn finger 429..449 CDD:275368 9/19 (47%)
C2H2 Zn finger 457..477 CDD:275368 9/19 (47%)
C2H2 Zn finger 486..504 CDD:275368 6/17 (35%)
PTZ00121 <641..>728 CDD:173412 10/86 (12%)
COG5048 935..>1028 CDD:227381 34/83 (41%)
zf-C2H2 935..957 CDD:395048 11/21 (52%)
C2H2 Zn finger 937..957 CDD:275368 10/19 (53%)
zf-H2C2_2 949..973 CDD:404364 12/23 (52%)
C2H2 Zn finger 965..986 CDD:275368 6/20 (30%)
C2H2 Zn finger 994..1014 CDD:275368 6/19 (32%)
ZNF254NP_975011.3 KRAB 13..73 CDD:214630
C2H2 Zn finger 184..204 CDD:275368 5/19 (26%)
C2H2 Zn finger 212..260 CDD:275368 8/47 (17%)
COG5048 264..625 CDD:227381 122/594 (21%)
C2H2 Zn finger 268..288 CDD:275368 9/19 (47%)
C2H2 Zn finger 296..316 CDD:275368 9/19 (47%)
C2H2 Zn finger 324..344 CDD:275368 7/21 (33%)
C2H2 Zn finger 352..372 CDD:275368 5/57 (9%)
C2H2 Zn finger 380..400 CDD:275368 7/43 (16%)
C2H2 Zn finger 408..428 CDD:275368 6/25 (24%)
C2H2 Zn finger 436..456 CDD:275368 6/29 (21%)
C2H2 Zn finger 464..484 CDD:275368 1/19 (5%)
C2H2 Zn finger 492..512 CDD:275368 7/66 (11%)
C2H2 Zn finger 520..540 CDD:275368 5/38 (13%)
C2H2 Zn finger 548..568 CDD:275368 10/19 (53%)
C2H2 Zn finger 576..596 CDD:275368 6/20 (30%)
C2H2 Zn finger 604..624 CDD:275368 6/19 (32%)
C2H2 Zn finger 632..652 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.