DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ham and ZNF484

DIOPT Version :9

Sequence 1:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster
Sequence 2:XP_011517375.1 Gene:ZNF484 / 83744 HGNCID:23385 Length:884 Species:Homo sapiens


Alignment Length:724 Identity:156/724 - (21%)
Similarity:228/724 - (31%) Gaps:256/724 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 LYSGD---EFSKDKKNSSLIREGDIDFTDDENGFDIRCEVCDKVYPDLDLLDDHLIGAHHFKQDE 368
            ::||:   |:|:.:||.......:|.......|....|..|.|.:.....|..|  ...|..:..
Human   381 IHSGEKPYEYSECEKNLPQNSNLNIHKKIHTGGKHFECTECGKAFTRKSTLSMH--QKIHTGEKP 443

  Fly   369 FPCKQCALRFCHRPLLIKHEAISHNNIRKYSCENCSKVFCDPSNLQRHIRAYHVGARCHPCPECG 433
            :.|.:|...|..:...|.||.| |...:.|.|.:|.|.|...|.|..|.| .|.|.....|.|||
Human   444 YVCTECGKAFIRKSHFITHERI-HTGEKPYECSDCGKSFIKKSQLHVHQR-IHTGENPFICSECG 506

  Fly   434 KTFGTSSGLKQHQHIHSSVKPFACEVCSKAYTQFSNLCRHKRMHATCRMQIKCDKCNQSFSTLTS 498
            |.|...:.|..||.||:..:|:.|.||.||:|..|||.:|:::| |.....||..|.:||:..:.
Human   507 KVFTHKTNLIIHQKIHTGERPYICTVCGKAFTDRSNLIKHQKIH-TGEKPYKCSDCGKSFTWKSR 570

  Fly   499 LTKHKKFCDSTGPGPYRNQHVNRHHQHPHQHPLPHQPHLAATATSTCPAPPRESSESSSSAAAAA 563
            |..|:| | .||         .||:                           |.||...:....:
Human   571 LRIHQK-C-HTG---------ERHY---------------------------ECSECGKAFIQKS 597

  Fly   564 VAAMSTPPNPFLMFRTAPSFFPGFPPYGFPPFLPQNPLHPTNIPMFFSKNPMDLGCGGPEITSPV 628
            ..:|                              ...:|....|...::      ||        
Human   598 TLSM------------------------------HQRIHRGEKPYVCTE------CG-------- 618

  Fly   629 SAFDQKLPFGFLKGENSESQAYDKVTEKELVFKAEEKLKKEPLVQAFEGEEDESRSSLDIKGKLE 693
            .||..|..|               :|.                                      
Human   619 KAFFHKSHF---------------ITH-------------------------------------- 630

  Fly   694 DTRNDSKSEEQDDMKQEPERVSTPDQQQAEDDRKSIDIMSTPPPADTPSGGDGPLDLSICRKRSA 758
                              ||:.|                           |:.|.:.|||     
Human   631 ------------------ERIHT---------------------------GEKPYECSIC----- 645

  Fly   759 GSFFTAPAEDNLMLHRFMPRLHEFE-----AERGQPLKMRKSHSSAESSTSQKSHKGSSPTPTPT 818
            |..||..::  |.:|:   ::|..|     ||.|:....|     :...|.||.|.|..|.....
Human   646 GKSFTKKSQ--LHVHQ---QIHTGEKPYRCAECGKAFTDR-----SNLFTHQKIHTGEKPYKCSD 700

  Fly   819 ASPGLTPSPS----PPTSAGGELSSTSEGGAVPTMAAAAFAADHSALASGPTLPQTHPTFHPLLL 879
            .....|....    ..:..|......||.|              .|.|...||         ::.
Human   701 CGKAFTRKSGLHIHQQSHTGERHYECSECG--------------KAFARKSTL---------IMH 742

  Fly   880 EEIYRSGFPFLCQPGGRRGIEALLAGAASAAAPKRPLPPVKFSAGSVVGLKTKDR-YSCKFCGKV 943
            :.|:....|::|...|:..|:                   |........:.|.:: |.|..|||.
Human   743 QRIHTGEKPYICNECGKSFIQ-------------------KSHLNRHRRIHTGEKPYECSDCGKS 788

  Fly   944 FPRSANLTRHLRTHTGEQPYPCKYCDRAFSISSNLQRHVRNIHNKERPFRCELCDRSFGQQTNLD 1008
            |.:.:.|..|.|.||||:||.|..|.:||:|.|||.:| :.||.|::|::|....::...:..|.
Human   789 FIKKSQLHEHHRIHTGEKPYICAECGKAFTIRSNLIKH-QKIHTKQKPYKCSDLGKALNWKPQLS 852

  Fly  1009 RHVKKHESE 1017
            ...|....|
Human   853 MPQKSDNGE 861

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978
C2H2 Zn finger 341..363 CDD:275368 5/21 (24%)
C2H2 Zn finger 371..392 CDD:275368 7/20 (35%)
SFP1 <391..479 CDD:227516 35/87 (40%)
C2H2 Zn finger 400..421 CDD:275368 8/20 (40%)
SUF4-like 403..>445 CDD:411020 16/41 (39%)
C2H2 Zn finger 403..421 CDD:411020 7/17 (41%)
C2H2 Zn finger 429..449 CDD:275368 9/19 (47%)
C2H2 Zn finger 457..477 CDD:275368 10/19 (53%)
C2H2 Zn finger 486..504 CDD:275368 6/17 (35%)
PTZ00121 <641..>728 CDD:173412 4/86 (5%)
COG5048 935..>1028 CDD:227381 32/83 (39%)
zf-C2H2 935..957 CDD:395048 9/21 (43%)
C2H2 Zn finger 937..957 CDD:275368 8/19 (42%)
zf-H2C2_2 949..973 CDD:404364 12/23 (52%)
C2H2 Zn finger 965..986 CDD:275368 9/20 (45%)
C2H2 Zn finger 994..1014 CDD:275368 3/19 (16%)
ZNF484XP_011517375.1 KRAB 25..84 CDD:214630
KRAB 25..64 CDD:279668
C2H2 Zn finger 313..333 CDD:275368