DRSC/TRiP Functional Genomics Resources

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Protein Alignment ham and ZNF84

DIOPT Version :9

Sequence 1:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster
Sequence 2:NP_001120844.1 Gene:ZNF84 / 7637 HGNCID:13159 Length:738 Species:Homo sapiens


Alignment Length:893 Identity:192/893 - (21%)
Similarity:295/893 - (33%) Gaps:295/893 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 KIRSVQDDCIGEANLQS-------YINAGYLWYETN----RYVNAGSEMVVDGRPKSPVQLNEDF 260
            |:...::..:|:..:.|       .::...:|::.|    :.:..|.|....|:   ...||.:|
Human    59 KLEQGEEPWVGDGEIPSSDSPEVWKVDGNMMWHQDNQDKLKIIKRGHECDAFGK---NFNLNMNF 120

  Fly   261 MNGGKVLAAAAAAAAAVVAASSSGAKSG-------------GGGSSAPSDDRSDRDNGSLYSGDE 312
            :...|              ::|.|...|             |....|.|||.:..||..|:|..|
Human   121 VPLRK--------------SNSEGDLDGLILKHHLDLLIPKGDYGKAESDDFNVFDNFFLHSKPE 171

  Fly   313 --------FSKDKKNSSLIREGDIDFTDDENGFDI-RCEVCDKVYPDLDLLDDHLIGAHHFKQDE 368
                    :..||...|..:...|.:..:..|..: .|..|.|.:.....|..|  .:.|.:...
Human   172 DTDTWLKYYDCDKYKESYKKSQIIIYHRNRLGEKLYECSECRKRFSKKPSLIKH--QSRHIRDIA 234

  Fly   369 FPCKQCALRFCHRPLLIKHEAISHNNIRKYSCENCSKVFCDPSNLQRHIRAYHVGARCHPCPECG 433
            |.|..|...|..:...|.|.. :|...:.|:|..|.|.|...|.|..|.|. |.|.:.:.|.|||
Human   235 FGCGNCGKTFPQKSQFITHHR-THTGEKPYNCSQCGKAFSQKSQLTSHQRT-HTGEKPYECGECG 297

  Fly   434 KTFGTSSGLKQHQHIHSSVKPFACEVCSKAYTQFSNLCRHKRMHATCRMQIKCDKCNQSFSTLTS 498
            |.|...|.|..|...|:..||:.|..|.:|:::.|||..|:|:| |.....:|.:|.::||..:.
Human   298 KAFSRKSHLISHWRTHTGEKPYGCNECGRAFSEKSNLINHQRIH-TGEKPFECRECGKAFSRKSQ 361

  Fly   499 LTKHKKFCDSTGPGPYRNQHVNR---------HHQHPHQHPLPHQPHLAATATSTCPAPPRESSE 554
            |..|.:  ..||..|:......:         .||..|....|::       .|.|....||.|.
Human   362 LVTHHR--THTGTKPFGCSDCRKAFFEKSELIRHQTIHTGEKPYE-------CSECRKAFRERSS 417

  Fly   555 SSSSAAAAAVAAMSTPPNPFLMFRTAPSFFPGFPPYGFPPFLPQNPLHPTNIPMFFSKNPMDLGC 619
            ..:..                  ||    ..|..|:|.                        :.|
Human   418 LINHQ------------------RT----HTGEKPHGC------------------------IQC 436

  Fly   620 GGPEITSPVSAFDQKLPFGFLKGENSESQAYDKVTEKELVFKAEEKLKKEPLVQAFEGEEDESRS 684
            |        .||.||                     ..|:........::|.:.:..|:....:|
Human   437 G--------KAFSQK---------------------SHLISHQMTHTGEKPFICSKCGKAFSRKS 472

  Fly   685 SLDIKGKLEDTRNDSKSEEQDDMKQEPERVSTPDQQQAEDDRKSIDIMSTPPPADTPSGGDGPLD 749
            .|        .|:              :|..|                           |:.|.:
Human   473 QL--------VRH--------------QRTHT---------------------------GEKPYE 488

  Fly   750 LSICRKRSAGSFFTAPAEDNLMLHRFMPRLHEFE-----AERGQPLKMRKSHSSAESSTSQKSHK 809
            .|.|.|..:...       :|..|:   |:|..|     :|.|:.. .:|||..:.    |::|.
Human   489 CSECGKAFSEKL-------SLTNHQ---RIHTGEKPYVCSECGKAF-CQKSHLISH----QRTHT 538

  Fly   810 GSSPTPTPTASPGLTPSPSPPTSAGGELSSTSEGGAVPTMAAAAFAADHSALASGPTLPQTHPTF 874
            |..|                        ...||.|       .|| .:.|:||       ||...
Human   539 GEKP------------------------YECSECG-------KAF-GEKSSLA-------THQRT 564

  Fly   875 HPLLLEEIYRSGFPFLCQPGGRRGIEALLAGAASAAAPKRPLPPVKFSAGSVVGLKTKDR-YSCK 938
            |        ....|:.|     |..|...:..:.....:|              :.|.:: |.|.
Human   565 H--------TGEKPYEC-----RDCEKAFSQKSQLNTHQR--------------IHTGEKPYECS 602

  Fly   939 FCGKVFPRSANLTRHLRTHTGEQPYPCKYCDRAFSISSNLQRHVRNIHNKERPFRCELCDRSFGQ 1003
            .|.|.|...:.|.|||||||||:||.|..|.:||...|:|..|.| ||..|:||.|..|.::|.:
Human   603 LCRKAFFEKSELIRHLRTHTGEKPYECNECRKAFREKSSLINHQR-IHTGEKPFECSECGKAFSR 666

  Fly  1004 QTNLDRHVKKHESEGNNFRDSPSSSGIAEREEYFDDIRKFMN--RVYT 1049
            :::|..|.:.|..|        ...|.:|..:.|....:.:|  |::|
Human   667 KSHLIPHQRTHTGE--------KPYGCSECRKAFSQKSQLVNHQRIHT 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978 8/56 (14%)
C2H2 Zn finger 341..363 CDD:275368 5/21 (24%)
C2H2 Zn finger 371..392 CDD:275368 5/20 (25%)
SFP1 <391..479 CDD:227516 33/87 (38%)
C2H2 Zn finger 400..421 CDD:275368 8/20 (40%)
SUF4-like 403..>445 CDD:411020 17/41 (41%)
C2H2 Zn finger 403..421 CDD:411020 7/17 (41%)
C2H2 Zn finger 429..449 CDD:275368 9/19 (47%)
C2H2 Zn finger 457..477 CDD:275368 8/19 (42%)
C2H2 Zn finger 486..504 CDD:275368 6/17 (35%)
PTZ00121 <641..>728 CDD:173412 8/86 (9%)
COG5048 935..>1028 CDD:227381 37/92 (40%)
zf-C2H2 935..957 CDD:395048 10/21 (48%)
C2H2 Zn finger 937..957 CDD:275368 9/19 (47%)
zf-H2C2_2 949..973 CDD:404364 15/23 (65%)
C2H2 Zn finger 965..986 CDD:275368 8/20 (40%)
C2H2 Zn finger 994..1014 CDD:275368 5/19 (26%)
ZNF84NP_001120844.1 KRAB 9..68 CDD:214630 1/8 (13%)
C2H2 Zn finger 209..229 CDD:275368 5/21 (24%)
C2H2 Zn finger 237..257 CDD:275368 5/20 (25%)
C2H2 Zn finger 265..285 CDD:275368 8/20 (40%)
zf-H2C2_2 278..302 CDD:316026 11/24 (46%)
C2H2 Zn finger 293..313 CDD:275368 9/19 (47%)
COG5048 317..724 CDD:227381 128/614 (21%)
C2H2 Zn finger 321..341 CDD:275368 8/19 (42%)
C2H2 Zn finger 349..369 CDD:275368 6/21 (29%)
C2H2 Zn finger 377..397 CDD:275368 2/19 (11%)
C2H2 Zn finger 405..425 CDD:275368 7/41 (17%)
C2H2 Zn finger 433..453 CDD:275368 7/72 (10%)
C2H2 Zn finger 461..481 CDD:275368 5/41 (12%)
C2H2 Zn finger 489..509 CDD:275368 6/29 (21%)
C2H2 Zn finger 517..537 CDD:275368 6/24 (25%)
C2H2 Zn finger 545..565 CDD:275368 10/34 (29%)
C2H2 Zn finger 573..593 CDD:275368 4/38 (11%)
C2H2 Zn finger 601..621 CDD:275368 9/19 (47%)
C2H2 Zn finger 629..649 CDD:275368 8/20 (40%)
C2H2 Zn finger 657..677 CDD:275368 5/19 (26%)
C2H2 Zn finger 685..705 CDD:275368 4/19 (21%)
C2H2 Zn finger 713..733 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

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