DRSC/TRiP Functional Genomics Resources

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Protein Alignment ham and ZNF490

DIOPT Version :9

Sequence 1:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster
Sequence 2:NP_065765.1 Gene:ZNF490 / 57474 HGNCID:23705 Length:529 Species:Homo sapiens


Alignment Length:786 Identity:148/786 - (18%)
Similarity:243/786 - (30%) Gaps:331/786 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 SSSGAKSGGGGSSAPSDDRSDRDNGSLYSGDEFSKDKKNSSLIREGDIDFTDDENGF-------- 337
            |||..::|.|||.......|:....|:       |.:.:|..:.:..::||.:|...        
Human    24 SSSQGRTGTGGSDVLQMQNSEHHGQSI-------KTQTDSISLEDVAVNFTLEEWALLDPGQRNI 81

  Fly   338 ----------DIRCEVCDKVYPDLDLLDDH----------LIGAHHFKQDEFPCKQCALRFCHRP 382
                      ::.| :.:| :.|.|:.|:|          ::.|....:::.||.:...:...  
Human    82 YRDVMRATFKNLAC-IGEK-WKDQDIEDEHKNQGRNLRSPMVEALCENKEDCPCGKSTSQIPD-- 142

  Fly   383 LLIKHEAISHNNIRKYSCENCSKVFCDPSNLQRHIRA---------YHVGARCHPCPECGKTFGT 438
              :.....:...::...|..|.:||....:|.||:|:         :..|.:.|.|.||||||..
Human   143 --LNTNLETPTGLKPCDCSVCGEVFMHQVSLNRHMRSHTEQKPNECHEYGEKPHKCKECGKTFTR 205

  Fly   439 SSGLKQHQHIHSSVKPFACEVCSKAYTQFSNLCRHKRMHATCRMQIKCDKCNQSFSTLTSLTKHK 503
            ||.::.|:.||:..||:.|:.|.||:....:...|.|:| |.....:|.:|.::|..||:|.:|:
Human   206 SSSIRTHERIHTGEKPYECKECGKAFAFLFSFRNHIRIH-TGETPYECKECGKAFRYLTALRRHE 269

  Fly   504 KFCDSTGPGPYRNQHVNR---------HHQHPHQHPLPHQPHLAATATSTCPAPPRESSESSSSA 559
            |  :.||..||:.:...:         .|:..|....|::......|.| ||...|...::    
Human   270 K--NHTGEKPYKCKQCGKAFIYYQPFLTHERTHTGEKPYECKQCGKAFS-CPTYLRSHEKT---- 327

  Fly   560 AAAAVAAMSTPPNPFLMFRTAPSFFPGFPPYGFPPFLPQNPLHPTNIPMFFSKNPMDLGCGGPEI 624
                    .|...||:......:||                                        
Human   328 --------HTGEKPFVCRECGRAFF---------------------------------------- 344

  Fly   625 TSPVSAFDQKLPFGFLKGENSESQAYDKVTEKELVFKAEEKLKKEPLVQAFEGEEDESRSSLDIK 689
                                                                     |.|||   
Human   345 ---------------------------------------------------------SHSSL--- 349

  Fly   690 GKLEDTRNDSKSEEQDDMKQEPERVSTPDQQQAEDDRKSIDIMSTPPPADTPSGGDGPLDLSICR 754
                                                ||.:...:...|             ..|:
Human   350 ------------------------------------RKHVKTHTGVQP-------------YTCK 365

  Fly   755 KRSAGSFFTAPAEDNLMLHRFMPRLHEFEAERGQPLKMRKSHSSAESSTSQKSHKGSSPTPTPTA 819
            |  .|..|                               ||.||.|  ..:::|.|..|...   
Human   366 K--CGEAF-------------------------------KSSSSCE--VHERTHFGEKPYEC--- 392

  Fly   820 SPGLTPSPSPPTSAGGELSSTSEGGAVPTMAAAAFAADHSALASGPTLPQTHPTFHPLLLEEIYR 884
                       ...|...:|:|            :...|..:.:|               |:.|.
Human   393 -----------KQCGKAFNSSS------------YLQLHERVHTG---------------EKTYE 419

  Fly   885 SGFPFLCQPGGRRGIEALLAGAASAAAPKRPLPPVKFSAGSVVGLKTKDR---YSCKFCGKVFPR 946
                  |:..|:    |.|                 :|....:..:|..|   |.||.||:||..
Human   420 ------CKECGK----AFL-----------------YSTHFRIHERTHTREKPYECKQCGRVFIY 457

  Fly   947 SANLTRHLRTHTGEQPYPCKYCDRAFSISSNLQRHVRNIHNKERPFRCELCDRSFGQQTNLDRHV 1011
            .::|.||.|:|||.:|..||.|.:||:..::|:.|.| ||..||||:|..|.::|....:|..|.
Human   458 FSHLRRHERSHTGVKPCECKQCGKAFTCLNSLKVHKR-IHTGERPFQCRQCGKAFSYSKSLHVHE 521

  Fly  1012 KKHESE 1017
            :.|..:
Human   522 RTHSRQ 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978
C2H2 Zn finger 341..363 CDD:275368 7/31 (23%)
C2H2 Zn finger 371..392 CDD:275368 1/20 (5%)
SFP1 <391..479 CDD:227516 31/96 (32%)
C2H2 Zn finger 400..421 CDD:275368 8/29 (28%)
SUF4-like 403..>445 CDD:411020 18/50 (36%)
C2H2 Zn finger 403..421 CDD:411020 7/26 (27%)
C2H2 Zn finger 429..449 CDD:275368 10/19 (53%)
C2H2 Zn finger 457..477 CDD:275368 6/19 (32%)
C2H2 Zn finger 486..504 CDD:275368 7/17 (41%)
PTZ00121 <641..>728 CDD:173412 5/86 (6%)
COG5048 935..>1028 CDD:227381 35/83 (42%)
zf-C2H2 935..957 CDD:395048 11/21 (52%)
C2H2 Zn finger 937..957 CDD:275368 10/19 (53%)
zf-H2C2_2 949..973 CDD:404364 12/23 (52%)
C2H2 Zn finger 965..986 CDD:275368 8/20 (40%)
C2H2 Zn finger 994..1014 CDD:275368 5/19 (26%)
ZNF490NP_065765.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 10/35 (29%)
KRAB 56..97 CDD:307490 5/41 (12%)
C2H2 Zn finger 133..150 CDD:275368 1/20 (5%)
C2H2 Zn finger 158..178 CDD:275368 8/19 (42%)
COG5048 192..>505 CDD:227381 110/581 (19%)
C2H2 Zn finger 196..216 CDD:275368 10/19 (53%)
C2H2 Zn finger 224..244 CDD:275368 6/19 (32%)
C2H2 Zn finger 252..272 CDD:275368 8/21 (38%)
C2H2 Zn finger 280..300 CDD:275368 1/19 (5%)
C2H2 Zn finger 308..328 CDD:275368 5/32 (16%)
C2H2 Zn finger 336..356 CDD:275368 8/155 (5%)
C2H2 Zn finger 364..384 CDD:275368 9/54 (17%)
C2H2 Zn finger 392..412 CDD:275368 4/45 (9%)
C2H2 Zn finger 420..440 CDD:275368 5/40 (13%)
C2H2 Zn finger 448..468 CDD:275368 10/19 (53%)
C2H2 Zn finger 476..496 CDD:275368 8/20 (40%)
C2H2 Zn finger 504..524 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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