DRSC/TRiP Functional Genomics Resources

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Protein Alignment ham and ZNF852

DIOPT Version :9

Sequence 1:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster
Sequence 2:NP_001274278.1 Gene:ZNF852 / 285346 HGNCID:27713 Length:530 Species:Homo sapiens


Alignment Length:799 Identity:158/799 - (19%)
Similarity:227/799 - (28%) Gaps:386/799 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 ASSSGAKSGG------GGSSA--------------PSDDRSDR-DNGSLYSGDEFSKDKKNSSLI 323
            :.||.:.|||      ||:..              ||::...| ::..|...||   |||.|:..
Human    67 SESSNSTSGGLFGVVPGGTETGDVCEDTFKELEGQPSNEEGSRLESDFLEIIDE---DKKKSTKD 128

  Fly   324 REGDIDFTDDENGFDIRCEVCDKVYPDLDLLDDH-------------LIGAHHFKQDEFPCKQCA 375
            |                       |.:...:::|             |.|     |..:.|.:|.
Human   129 R-----------------------YEEYKEVEEHPPLSSSPVEHEGVLKG-----QKSYRCDECG 165

  Fly   376 LRFCHRPLLIKHEAISHNNIRKYSCENCSKVFCDPSNLQRHIRAYHVGARCHPCPECGKTFGTSS 440
            ..|.....||.|..| |...:.|.|..|.|.|...|.|..|:|. |.|.:.:.|.||||.:..||
Human   166 KAFYWSSHLIGHRRI-HTGEKPYECNECGKTFRQTSQLIVHLRT-HTGEKPYECSECGKAYRHSS 228

  Fly   441 GLKQHQHIHSSVKPFACEVCSKAYTQFSNLCRHKRMHATCRMQIKCDKCNQSFSTLTSLTKHKKF 505
            .|.|||.:|:..||:.|..|:||:.|.|.|..|:|.| |.....:|.:|..:||...:|.:|:..
Human   229 HLIQHQRLHNGEKPYKCNECAKAFNQSSKLFDHQRTH-TGEKPYECKECGAAFSRSKNLVRHQFL 292

  Fly   506 CDSTGPGPYRNQHVNR---------HHQHPHQHPLPHQPHLAATATSTCPAPPRESSESSSSAAA 561
              .||..||:.....|         .||..|....|::.:....|.|......|..|        
Human   293 --HTGKKPYKCNECGRAFCSNRNLIDHQRTHTGEKPYKCNECGKAFSRSKCLIRHQS-------- 347

  Fly   562 AAVAAMSTPPNPFLMFRTAPSFFPGFPPYGFPPFLPQNPLHPTNIPMFFSKNPMDLGCGGPEITS 626
                                                   ||....|...|:      ||      
Human   348 ---------------------------------------LHTGEKPYKCSE------CG------ 361

  Fly   627 PVSAFDQKLPFGFLKGENSESQAYDKVTEKELVFKAEEKLKKEPLVQAFEGEEDESRSSLDIKGK 691
                                 :|::::::               ||                   
Human   362 ---------------------KAFNQISQ---------------LV------------------- 371

  Fly   692 LEDTRNDSKSEEQDDMKQEPERVSTPDQQQAEDDRKSIDIMSTPPPADTPSGGDGPLDLSICRKR 756
                              |.||:.|                           |:.|...|.|.| 
Human   372 ------------------EHERIHT---------------------------GEKPFKCSECGK- 390

  Fly   757 SAGSFFTAPAEDNLMLHRFMPRLHEFEAERGQPLKMRKSHSSAESST----SQKSHKGSSPTPTP 817
               :|..:..   |:.|:   |||..|    :|.|..:...|...::    .|:.|.|..|    
Human   391 ---AFGLSKC---LIRHQ---RLHTSE----KPYKCNECGKSFNQNSYLIIHQRIHTGEKP---- 438

  Fly   818 TASPGLTPSPSPPTSAGGELSSTSEGGAVPTMAAAAFAADHSALASGPTLPQTHPTFHPLLLEEI 882
                                                                             
Human   439 ----------------------------------------------------------------- 438

  Fly   883 YRSGFPFLCQPGGRRGIEALLAGAASAAAPKRPLPPVKFSAGSVVGLKTKDRYSCKFCGKVFPRS 947
                                                                |.|..|||||..:
Human   439 ----------------------------------------------------YECNECGKVFSYN 451

  Fly   948 ANLTRHLRTHTGEQPYPCKYCDRAFSISSNLQRHVRNIHNKERPFRCELCDRSFGQQTNLDRHVK 1012
            ::|..|.||||||:||.|..|.:|||.||.|..|.| :|..|:|:.|..|.::|.|::..:.|.:
Human   452 SSLMVHQRTHTGEKPYKCNSCGKAFSDSSQLTVHQR-VHTGEKPYECIECGKAFSQRSTFNHHQR 515

  Fly  1013 KHESEGNNFRDSPSSSGIA 1031
            .|..|        ..||:|
Human   516 THAGE--------KPSGLA 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978
C2H2 Zn finger 341..363 CDD:275368 4/34 (12%)
C2H2 Zn finger 371..392 CDD:275368 7/20 (35%)
SFP1 <391..479 CDD:227516 36/87 (41%)
C2H2 Zn finger 400..421 CDD:275368 8/20 (40%)
SUF4-like 403..>445 CDD:411020 17/41 (41%)
C2H2 Zn finger 403..421 CDD:411020 7/17 (41%)
C2H2 Zn finger 429..449 CDD:275368 11/19 (58%)
C2H2 Zn finger 457..477 CDD:275368 9/19 (47%)
C2H2 Zn finger 486..504 CDD:275368 6/17 (35%)
PTZ00121 <641..>728 CDD:173412 7/86 (8%)
COG5048 935..>1028 CDD:227381 37/92 (40%)
zf-C2H2 935..957 CDD:395048 10/21 (48%)
C2H2 Zn finger 937..957 CDD:275368 9/19 (47%)
zf-H2C2_2 949..973 CDD:404364 13/23 (57%)
C2H2 Zn finger 965..986 CDD:275368 10/20 (50%)
C2H2 Zn finger 994..1014 CDD:275368 5/19 (26%)
ZNF852NP_001274278.1 KRAB_A-box 8..47 CDD:143639
COG5048 156..514 CDD:227381 130/657 (20%)
C2H2 Zn finger 161..181 CDD:275368 7/20 (35%)
zf-H2C2_2 177..198 CDD:290200 8/21 (38%)
C2H2 Zn finger 189..209 CDD:275368 8/20 (40%)
zf-H2C2_2 202..226 CDD:290200 10/24 (42%)
C2H2 Zn finger 217..237 CDD:275368 11/19 (58%)
C2H2 Zn finger 245..265 CDD:275368 9/19 (47%)
zf-H2C2_2 261..282 CDD:290200 7/21 (33%)
C2H2 Zn finger 273..293 CDD:275368 6/21 (29%)
zf-C2H2 299..321 CDD:278523 4/21 (19%)
C2H2 Zn finger 301..321 CDD:275368 3/19 (16%)
zf-H2C2_2 313..338 CDD:290200 5/24 (21%)
C2H2 Zn finger 329..349 CDD:275368 4/66 (6%)
zf-H2C2_2 342..366 CDD:290200 9/103 (9%)
C2H2 Zn finger 357..377 CDD:275368 9/104 (9%)
zf-H2C2_2 370..392 CDD:290200 11/89 (12%)
C2H2 Zn finger 385..405 CDD:275368 7/29 (24%)
zf-H2C2_2 398..422 CDD:290200 9/30 (30%)
C2H2 Zn finger 413..433 CDD:275368 2/19 (11%)
zf-H2C2_2 425..450 CDD:290200 11/145 (8%)
C2H2 Zn finger 441..461 CDD:275368 9/19 (47%)
zf-H2C2_2 453..477 CDD:290200 13/23 (57%)
C2H2 Zn finger 469..489 CDD:275368 10/20 (50%)
zf-H2C2_2 482..506 CDD:290200 9/24 (38%)
C2H2 Zn finger 497..517 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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