DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ham and prz1

DIOPT Version :10

Sequence 1:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster
Sequence 2:NP_593073.1 Gene:prz1 / 2541806 PomBaseID:SPAC4G8.13C Length:681 Species:Schizosaccharomyces pombe


Alignment Length:697 Identity:139/697 - (19%)
Similarity:216/697 - (30%) Gaps:271/697 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   536 HLAATATSTCPAPPRE---SSESSSSAAAAAVAAMSTP---------PNPFLMFRTAPSF--FPG 586
            |.....||....|..|   :||.|||       .:|.|         ||....|:|:...  :..
pombe    37 HTYMNDTSLADIPLFEDTLASEVSSS-------LISNPSKNNIQHLHPNTSEPFKTSSKSDEYDS 94

  Fly   587 FPPYGFPPFLPQNPLHPTNIPMFFSK-------NPMDLGCGGPEITSPVSAFDQKLPFGFLKGEN 644
            :|..|..|......|:.|::..|.|:       :|:......|:      |||      ..:|.:
pombe    95 YPRTGNVPTFSFTELNDTSVSGFGSQAVFENSVSPLSNPSNSPQ------AFD------LTQGSS 147

  Fly   645 SESQAYD-----------------------------------KVTEKELVFKAEEKL-------- 666
            |...|.|                                   .:...|:...:..:|        
pombe   148 STHNANDFTVNNVGSRRQSIYEFNIGIPSSNIDSSQFLPVSRAIAASEISPSSSPQLLTSFLPSG 212

  Fly   667 ----KKEPLVQAFEGE--EDESRSSLDIKGKLEDTRNDSKSEEQDDMKQEPERVSTPDQQQAEDD 725
                ...|.:|...|.  |.::.:.:|:..:...|..||:.....|. ::|..:.  :.||    
pombe   213 SVSNPSSPYLQGSVGALYEADAFNFVDVMSQASGTEVDSERFPSVDF-EDPSLLM--ENQQ---- 270

  Fly   726 RKSIDIMSTPPPAD---TPSGGDGPLDLSICRKRSAGSFFTA-PAEDNLMLHRFMPRLHEFEAER 786
                :|..|...||   .||.|            |.|:|..| |.|.|..:        :|:.:.
pombe   271 ----NITGTGSFADYLQPPSSG------------SLGAFTNASPGESNTGI--------DFDTDN 311

  Fly   787 ---GQPLKMRKSHSS-----AESSTSQKSHKGS-------------------------SPTPTPT 818
               ...:.:..:||:     ..|.:::.||:.|                         ||.....
pombe   312 TNLNPSVDLLSNHSTPSFIFENSPSAEFSHQSSPYLVPNSGRTLNSENARESTIRSVNSPFSEDH 376

  Fly   819 ASPGLTP---SPSPPTSAGGEL--------SSTSEGGAVPTMAAAAFAADHSALASGPTLPQTHP 872
            |...||.   .|..||:....:        |.|.:...||        :..|...|||:||.   
pombe   377 ADASLTTHVFDPISPTALSNSVLNYDSNNFSGTPQINVVP--------SSPSKSQSGPSLPA--- 430

  Fly   873 TFHPLLLEEI----YRSGFPFLCQPGGRRGIEALLAGAASAAAPK-------------------- 913
              :|||..:|    .:|..|...||........|  ..|:..||:                    
pombe   431 --NPLLQTDISITYSQSASPVSGQPAMNENSYDL--QNANLCAPEMSPTYTARHRSNSAGSRFDA 491

  Fly   914 -RPLP------------------------------------------PVKFSAGSVVGLKTKD-- 933
             .|:|                                          |...|..|:||.|:::  
pombe   492 YEPIPQLYTHFSHSSECLSVNQDTELLGKIENDNSKSNDYLSVRNTRPRSRSLNSLVGNKSENSS 556

  Fly   934 ------------RYSCKF--CGKVFPRSANLTRHLRTHTGEQPYPCKYCDRAFSISSNLQRHVRN 984
                        .|.|.|  |.|.|.|:.||..|:.|||..:|:.|..|.::|:...:.:|| ..
pombe   557 SSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRH-EQ 620

  Fly   985 IHNKERPFRCELCDRSFGQQTNLDRHVKKHESE-GNNFRDSPSSSGI 1030
            :|...:.|.|..|::.|.:...|:||.|   || |.|...:.:..||
pombe   621 LHTGIKAFACVTCNQRFARMDALNRHYK---SEVGQNCLRTATERGI 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978
C2H2 Zn finger 341..363 CDD:275368
C2H2 Zn finger 371..392 CDD:275368
SFP1 <391..479 CDD:227516
C2H2 Zn finger 400..421 CDD:275368
SUF4-like 403..>445 CDD:411020
C2H2 Zn finger 403..421 CDD:411020
C2H2 Zn finger 429..449 CDD:275368
C2H2 Zn finger 457..477 CDD:275368
C2H2 Zn finger 486..504 CDD:275368
PTZ00121 <641..>728 CDD:173412 18/135 (13%)
COG5048 935..>1028 CDD:227381 32/95 (34%)
zf-C2H2 935..957 CDD:395048 10/23 (43%)
C2H2 Zn finger 937..957 CDD:275368 9/21 (43%)
zf-H2C2_2 949..973 CDD:463886 9/23 (39%)
C2H2 Zn finger 965..986 CDD:275368 5/20 (25%)
C2H2 Zn finger 994..1014 CDD:275368 7/19 (37%)
prz1NP_593073.1 COG5048 121..620 CDD:227381 101/557 (18%)
C2H2 Zn finger 577..594 CDD:275368 7/16 (44%)
C2H2 Zn finger 602..622 CDD:275368 5/20 (25%)
C2H2 Zn finger 630..648 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.