DRSC/TRiP Functional Genomics Resources

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Protein Alignment ham and prz1

DIOPT Version :9

Sequence 1:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster
Sequence 2:NP_593073.1 Gene:prz1 / 2541806 PomBaseID:SPAC4G8.13c Length:681 Species:Schizosaccharomyces pombe


Alignment Length:697 Identity:139/697 - (19%)
Similarity:216/697 - (30%) Gaps:271/697 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   536 HLAATATSTCPAPPRE---SSESSSSAAAAAVAAMSTP---------PNPFLMFRTAPSF--FPG 586
            |.....||....|..|   :||.|||       .:|.|         ||....|:|:...  :..
pombe    37 HTYMNDTSLADIPLFEDTLASEVSSS-------LISNPSKNNIQHLHPNTSEPFKTSSKSDEYDS 94

  Fly   587 FPPYGFPPFLPQNPLHPTNIPMFFSK-------NPMDLGCGGPEITSPVSAFDQKLPFGFLKGEN 644
            :|..|..|......|:.|::..|.|:       :|:......|:      |||      ..:|.:
pombe    95 YPRTGNVPTFSFTELNDTSVSGFGSQAVFENSVSPLSNPSNSPQ------AFD------LTQGSS 147

  Fly   645 SESQAYD-----------------------------------KVTEKELVFKAEEKL-------- 666
            |...|.|                                   .:...|:...:..:|        
pombe   148 STHNANDFTVNNVGSRRQSIYEFNIGIPSSNIDSSQFLPVSRAIAASEISPSSSPQLLTSFLPSG 212

  Fly   667 ----KKEPLVQAFEGE--EDESRSSLDIKGKLEDTRNDSKSEEQDDMKQEPERVSTPDQQQAEDD 725
                ...|.:|...|.  |.::.:.:|:..:...|..||:.....|. ::|..:.  :.||    
pombe   213 SVSNPSSPYLQGSVGALYEADAFNFVDVMSQASGTEVDSERFPSVDF-EDPSLLM--ENQQ---- 270

  Fly   726 RKSIDIMSTPPPAD---TPSGGDGPLDLSICRKRSAGSFFTA-PAEDNLMLHRFMPRLHEFEAER 786
                :|..|...||   .||.|            |.|:|..| |.|.|..:        :|:.:.
pombe   271 ----NITGTGSFADYLQPPSSG------------SLGAFTNASPGESNTGI--------DFDTDN 311

  Fly   787 ---GQPLKMRKSHSS-----AESSTSQKSHKGS-------------------------SPTPTPT 818
               ...:.:..:||:     ..|.:::.||:.|                         ||.....
pombe   312 TNLNPSVDLLSNHSTPSFIFENSPSAEFSHQSSPYLVPNSGRTLNSENARESTIRSVNSPFSEDH 376

  Fly   819 ASPGLTP---SPSPPTSAGGEL--------SSTSEGGAVPTMAAAAFAADHSALASGPTLPQTHP 872
            |...||.   .|..||:....:        |.|.:...||        :..|...|||:||.   
pombe   377 ADASLTTHVFDPISPTALSNSVLNYDSNNFSGTPQINVVP--------SSPSKSQSGPSLPA--- 430

  Fly   873 TFHPLLLEEI----YRSGFPFLCQPGGRRGIEALLAGAASAAAPK-------------------- 913
              :|||..:|    .:|..|...||........|  ..|:..||:                    
pombe   431 --NPLLQTDISITYSQSASPVSGQPAMNENSYDL--QNANLCAPEMSPTYTARHRSNSAGSRFDA 491

  Fly   914 -RPLP------------------------------------------PVKFSAGSVVGLKTKD-- 933
             .|:|                                          |...|..|:||.|:::  
pombe   492 YEPIPQLYTHFSHSSECLSVNQDTELLGKIENDNSKSNDYLSVRNTRPRSRSLNSLVGNKSENSS 556

  Fly   934 ------------RYSCKF--CGKVFPRSANLTRHLRTHTGEQPYPCKYCDRAFSISSNLQRHVRN 984
                        .|.|.|  |.|.|.|:.||..|:.|||..:|:.|..|.::|:...:.:|| ..
pombe   557 SSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRH-EQ 620

  Fly   985 IHNKERPFRCELCDRSFGQQTNLDRHVKKHESE-GNNFRDSPSSSGI 1030
            :|...:.|.|..|::.|.:...|:||.|   || |.|...:.:..||
pombe   621 LHTGIKAFACVTCNQRFARMDALNRHYK---SEVGQNCLRTATERGI 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978
C2H2 Zn finger 341..363 CDD:275368
C2H2 Zn finger 371..392 CDD:275368
SFP1 <391..479 CDD:227516
C2H2 Zn finger 400..421 CDD:275368
SUF4-like 403..>445 CDD:411020
C2H2 Zn finger 403..421 CDD:411020
C2H2 Zn finger 429..449 CDD:275368
C2H2 Zn finger 457..477 CDD:275368
C2H2 Zn finger 486..504 CDD:275368
PTZ00121 <641..>728 CDD:173412 18/135 (13%)
COG5048 935..>1028 CDD:227381 32/95 (34%)
zf-C2H2 935..957 CDD:395048 10/23 (43%)
C2H2 Zn finger 937..957 CDD:275368 9/21 (43%)
zf-H2C2_2 949..973 CDD:404364 9/23 (39%)
C2H2 Zn finger 965..986 CDD:275368 5/20 (25%)
C2H2 Zn finger 994..1014 CDD:275368 7/19 (37%)
prz1NP_593073.1 COG5048 121..620 CDD:227381 101/557 (18%)
zf-C2H2 570..594 CDD:278523 10/23 (43%)
C2H2 Zn finger 577..594 CDD:275368 7/16 (44%)
zf-H2C2_2 586..611 CDD:290200 10/24 (42%)
C2H2 Zn finger 602..622 CDD:275368 5/20 (25%)
zf-H2C2_2 616..639 CDD:290200 7/23 (30%)
C2H2 Zn finger 630..648 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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