DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ham and Zfp62

DIOPT Version :9

Sequence 1:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster
Sequence 2:NP_001349654.1 Gene:Zfp62 / 22720 MGIID:99662 Length:914 Species:Mus musculus


Alignment Length:991 Identity:204/991 - (20%)
Similarity:339/991 - (34%) Gaps:293/991 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 EMVVDGRPKSPVQLNEDFMNGGKVLAAAAAAAAAVVAASSSGAKSGGGGSSAPSDDRSDRDNGS- 306
            ||:......:.::|.:|.....|....:.......:....:..|.|         :.::..||: 
Mouse    65 EMIDTHTNAANIKLEQDDETSEKSFYPSTNTMHQTIPTEPNCTKQG---------EHTENINGNV 120

  Fly   307 ---------LYSGDEFSKD-KKNSSLIRE-----GDIDF-TDDENGF------------------ 337
                     |:..||..|. |.||.|::.     |:..: .||..|.                  
Mouse   121 HPAHIADKKLHKCDECGKSFKYNSRLVQHKIMHTGEKRYECDDCRGTFRSSSSLRVHKRIHTGEK 185

  Fly   338 DIRCEVCDKVYPDLDLLDDHLIGAHHFKQDEFPCKQCALRFCHRPLLIKHEAISHNNIRKYSCEN 402
            ..:|:.|.|.|.....|.:|  .:.|..:....|.:|...|.:..:|.:|:.| |...:.|.|..
Mouse   186 PYKCDECGKAYMSYSSLINH--KSTHSGEKNCKCDECGKSFNYSSVLDQHKRI-HTGEKPYECGE 247

  Fly   403 CSKVFCDPSNLQRHIRAYHVGARCHPCPECGKTFGTSSGLKQHQHIHSSVKPFACEVCSKAYTQF 467
            |.|.|.:.|.|:.|.| .|.|.:.:.|..|||||..||||:.|:.||:..||:.|:.|.||:...
Mouse   248 CGKAFRNSSGLRVHKR-IHTGEKPYECDTCGKTFSNSSGLRVHKRIHTGEKPYECDECGKAFITC 311

  Fly   468 SNLCRHKRMHATCRMQIKCDKCNQSFSTLTSLTKHKKF--------CDSTGPGPYRNQHVNRHHQ 524
            ..|..||.:|...: ..|||:|.:||:..:.|.:||..        ||..|.. :||......|:
Mouse   312 RTLLNHKSIHFGDK-PYKCDECEKSFNYSSLLIQHKVIHTGEKPYECDECGKA-FRNSSGLIVHK 374

  Fly   525 HPHQHPLPHQPHLAATATSTCPA--------PPRESSESSSSAAAAAVAAM-------STPPNPF 574
            ..|....|::..:...|.|....        |.:::.|......:.:..::       .|...|:
Mouse   375 RIHTGEKPYKCDICGKAFSYSSGLAVHKSIHPGKKAHECKDCGKSFSYNSLLLQHKTIHTGERPY 439

  Fly   575 LMFRTAPSF------------FPGFPPYGFPPFLPQNPLHPTNIPMFFSKNPMDLGCGGPEITSP 627
            :......:|            ..|..||                       ..|: ||    .:.
Mouse   440 VCDVCGKTFRNNSGLKVHRRLHTGEKPY-----------------------KCDV-CG----KAY 476

  Fly   628 VSAFDQKLPFGFLKGENSESQAYDKVTEKELVFKAEEKLKKEPLVQAFE--------GEEDESRS 684
            :|....|...|...||.....:|   .||.  |.....|::...:...|        |:...:.|
Mouse   477 ISRSSLKNHKGIHMGEKPYKCSY---CEKS--FNYSSALEQHKRIHTREKPFGCDECGKAFRNNS 536

  Fly   685 SLDIKGKLEDTRNDSKSEEQDDMKQEPERVSTPDQQQAEDDRKSIDIMSTPPPADTPSG------ 743
            .|.:..::.......|.||..               :|.....|:....:..|.:.|..      
Mouse   537 GLKVHKRIHTGERPYKCEECG---------------KAYISLSSLINHKSVHPGEKPFKCDECEK 586

  Fly   744 ----------------GDGPLDLSICRKRSAGSF-FTAPAEDNLMLHRFMPRLHEFEAERGQPLK 791
                            |:.|....:|.|    || :|:....:..:|   .|...||.:|.:  |
Mouse   587 AFITYRTLLNHKKIHLGEKPYKCDVCEK----SFNYTSLLSQHKRVH---TREKPFECDRCE--K 642

  Fly   792 MRKSHSSAESSTSQKSHKGSSPTPTPTASPGLTPSPSPPTSAGGELSSTSEGGAVPTMAAAAFAA 856
            :.:::||.:  ..::.|.|..|...                               .:...|:.:
Mouse   643 VFRNNSSLK--VHKRIHTGEKPYEC-------------------------------DICGKAYIS 674

  Fly   857 DHSALASGPTLPQTHPTFHPLLLEEIYRSGF----------------PFLCQPGGRRGIEALLAG 905
             ||:|.:..:   |||.......:|..::.|                ||.|...|:         
Mouse   675 -HSSLINHKS---THPGKTSYTCDECGKAFFSSRTLISHKRVHLGEKPFKCVECGK--------- 726

  Fly   906 AASAAAPKRPLPPVKFSAGSVVG----LKTKDR-YSCKFCGKVFPRSANLTRHLRTHTGEQPYPC 965
                          .||..|::.    :.|.:: |.|.:|||.|..|:.||.|.|.||||:||.|
Mouse   727 --------------SFSYSSLLSQHKRIHTGEKPYVCDWCGKAFRNSSGLTVHKRIHTGEKPYGC 777

  Fly   966 KYCDRAFSISSNLQRHV--------------------------RNIHNKERPFRCELCDRSFGQQ 1004
            ..|::|:...|:|..|.                          :.||..::|:||..|.::|..:
Mouse   778 DECEKAYISHSSLINHKSVHRGKQPYNCECGKSFNYRSVLDQHKRIHTGKKPYRCNDCGKAFNIR 842

  Fly  1005 TNLDRHVKKHESEGN-NFRDSPSSSGIAEREEYFDDIRKFMNRVYTPNSLAGN--EGDTEEYPNS 1066
            :||.:|.:.|..|.: |..:..|.||..::..|::.          .|||.|.  :....|..::
Mouse   843 SNLTKHKRIHTGEESLNMANMESHSGTFQKMIYYEG----------GNSLDGTRMQMPVWEAEHA 897

  Fly  1067 DDQSVNLEKDSGNFNN 1082
            ..|...:|:....:||
Mouse   898 KSQRNQIEEKLYEYNN 913

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978 2/9 (22%)
C2H2 Zn finger 341..363 CDD:275368 6/21 (29%)
C2H2 Zn finger 371..392 CDD:275368 6/20 (30%)
SFP1 <391..479 CDD:227516 35/87 (40%)
C2H2 Zn finger 400..421 CDD:275368 8/20 (40%)
SUF4-like 403..>445 CDD:411020 19/41 (46%)
C2H2 Zn finger 403..421 CDD:411020 7/17 (41%)
C2H2 Zn finger 429..449 CDD:275368 11/19 (58%)
C2H2 Zn finger 457..477 CDD:275368 7/19 (37%)
C2H2 Zn finger 486..504 CDD:275368 7/17 (41%)
PTZ00121 <641..>728 CDD:173412 15/94 (16%)
COG5048 935..>1028 CDD:227381 37/119 (31%)
zf-C2H2 935..957 CDD:395048 11/21 (52%)
C2H2 Zn finger 937..957 CDD:275368 10/19 (53%)
zf-H2C2_2 949..973 CDD:404364 13/23 (57%)
C2H2 Zn finger 965..986 CDD:275368 6/46 (13%)
C2H2 Zn finger 994..1014 CDD:275368 6/19 (32%)
Zfp62NP_001349654.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 80..101 2/20 (10%)
COG5048 127..542 CDD:227381 104/453 (23%)
C2H2 Zn finger 133..153 CDD:275368 7/19 (37%)
C2H2 Zn finger 161..181 CDD:275368 3/19 (16%)
C2H2 Zn finger 189..209 CDD:275368 6/21 (29%)
C2H2 Zn finger 217..237 CDD:275368 6/20 (30%)
C2H2 Zn finger 245..265 CDD:275368 8/20 (40%)
C2H2 Zn finger 273..293 CDD:275368 11/19 (58%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
C2H2 Zn finger 329..349 CDD:275368 8/19 (42%)
C2H2 Zn finger 357..377 CDD:275368 6/20 (30%)
SFP1 <379..458 CDD:227516 8/78 (10%)
C2H2 Zn finger 385..405 CDD:275368 2/19 (11%)
C2H2 Zn finger 413..433 CDD:275368 0/19 (0%)
COG5048 437..850 CDD:227381 97/529 (18%)
C2H2 Zn finger 441..461 CDD:275368 1/19 (5%)
C2H2 Zn finger 469..489 CDD:275368 6/24 (25%)
C2H2 Zn finger 497..517 CDD:275368 5/24 (21%)
C2H2 Zn finger 525..545 CDD:275368 3/19 (16%)
C2H2 Zn finger 553..573 CDD:275368 4/34 (12%)
C2H2 Zn finger 581..601 CDD:275368 0/19 (0%)
C2H2 Zn finger 609..629 CDD:275368 5/23 (22%)
C2H2 Zn finger 637..657 CDD:275368 4/23 (17%)
C2H2 Zn finger 665..685 CDD:275368 4/54 (7%)
C2H2 Zn finger 693..713 CDD:275368 2/19 (11%)
C2H2 Zn finger 721..741 CDD:275368 5/42 (12%)
C2H2 Zn finger 749..769 CDD:275368 10/19 (53%)
C2H2 Zn finger 777..797 CDD:275368 6/19 (32%)
C2H2 Zn finger 805..824 CDD:275368 0/18 (0%)
C2H2 Zn finger 832..852 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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