DRSC/TRiP Functional Genomics Resources

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Protein Alignment ham and Zfp27

DIOPT Version :9

Sequence 1:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster
Sequence 2:NP_001032796.1 Gene:Zfp27 / 22689 MGIID:99174 Length:819 Species:Mus musculus


Alignment Length:762 Identity:165/762 - (21%)
Similarity:253/762 - (33%) Gaps:235/762 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 CEVCDKVYPDLDLLDDHLIGAHHFKQDEFPCKQCALRFCHRPLLIKHEAISHNNIRKYSCENCSK 405
            |....|::.....|..|:......|.  :.|.:|..........:.|:. :|...:.|.|.:|.|
Mouse   179 CAEFGKIFTQKSQLRVHVTSPTGEKL--YVCVECGKACSQTSEFLTHQK-THTREKPYKCGDCGK 240

  Fly   406 VFCDPSNLQRHIRAYHVGARCHPCPECGKTFGTSSGLKQHQHIHSSVKPFACEVCSKAYTQFSNL 470
            .|...|:|.|| |..|.|.:.:.|..|||.|..:|.|:.||.||:..|...|..|.||:||.|.|
Mouse   241 SFFQVSSLFRH-RRIHTGEKLYDCSHCGKGFSYNSDLRIHQKIHTGEKRHGCVDCGKAFTQKSTL 304

  Fly   471 CRHKRMHATCRMQIKCDKCNQSFSTLTSLTKHKKFCDSTGPGPYRNQHVNRH---------HQHP 526
            ..|:::|...|..: |.:|.|:|...|.|..|::.  .||..||......:.         ||..
Mouse   305 RMHQKIHTGERAYV-CIECGQAFIQKTHLVAHRRI--HTGEKPYACDGCGKAFLSKSQLLVHQRI 366

  Fly   527 HQHPLPHQPHLAATATSTCPAPPRESSESSSSAAAAAVAAMSTPPNPFLMFRTAPSFFPGFPPYG 591
            |....|            |.:..|....||:                                  
Mouse   367 HSRVRP------------CVSLDRAKPFSSA---------------------------------- 385

  Fly   592 FPPFLPQNPLHPTNIPMFFSKNPMDLGCGGPEITSPVSAFDQKLPFGFLKGENSESQAYDKVTEK 656
             |..||:..:      ....|:.:...||        .||..:                     .
Mouse   386 -PNLLPRKKV------QMREKSSICAECG--------KAFTYR---------------------S 414

  Fly   657 ELVFKAEEKLKKEPLVQAFEGEEDESRSSLDIKGKLEDTRNDSKSEEQDDMKQEPERVSTPDQ-- 719
            ||:........::|......|:....:|:|.:.                      .|:.|.::  
Mouse   415 ELIIHQRTHTGEKPYQCGDCGKAFTQKSALTVH----------------------RRIHTGEKSY 457

  Fly   720 ----------QQAEDDRKSIDIMSTPPPADTPSGGDGPLDLSICRKRSAGSFFTAPAEDNLMLHR 774
                      |:|..|  :..::.|         |:.|.....|     |.|||:.::  |.:|:
Mouse   458 VCVKCGLAFVQRAHLD--AHQVIHT---------GEKPYQCGHC-----GKFFTSKSQ--LHVHK 504

  Fly   775 FMPRLHEFE------------AERGQPLKMRKSHSS----------------AESSTSQKSHKGS 811
               |:|..|            |.|...:..:|:|:.                ::..|.|:.|.|.
Mouse   505 ---RIHTGEKPYVCSNCGKAFANRSNLITHQKTHTGEKAYVCARCGKAFTQRSDLVTHQRIHTGE 566

  Fly   812 SPTPTPTASPGLTPSPSPPTSAGGELSSTSEGGAVPTMAAAAFAADHSALASGPTLPQTHPTFH- 875
            .|....|.....|           :.|..|....:.|........|.....:..::...|...| 
Mouse   567 KPYGCSTCGKAFT-----------QKSHLSIHEKIHTGERQYGCRDCGKAFNQKSILIVHQKIHT 620

  Fly   876 ---PLLLEE-----IYRSGF-----------PFLCQPGGRRGIEALLAGAASAAAPKRPL----- 916
               |.:..|     |.:|.|           |:.|...|:.      ..:.|.....||:     
Mouse   621 GEKPHVCAECGRAFIRKSNFITHQRIHTGEKPYGCTDCGKS------FTSKSQLLVHRPIHTGEK 679

  Fly   917 PPV------KFSAGSVVGLKTKDR-----YSCKFCGKVFPRSANLTRHLRTHTGEQPYPCKYCDR 970
            |.|      .||..|.:....|..     |:|..|||.|.:.:.|..|.|.||||:||.|..|.:
Mouse   680 PYVCAECGKAFSGRSNLSKHQKTHTGEKPYACSECGKSFRQKSELITHHRIHTGEKPYDCGDCGK 744

  Fly   971 AFSISSNLQRHVRNIHNKERPFRCELCDRSFGQQTNLDRHVKKHESE 1017
            :|:..|.||.|.| ||..|:|:||..|.::|..::||::|...|..|
Mouse   745 SFTKKSQLQVHQR-IHTGEKPYRCAECGKAFTDRSNLNKHQTTHTGE 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978
C2H2 Zn finger 341..363 CDD:275368 4/21 (19%)
C2H2 Zn finger 371..392 CDD:275368 3/20 (15%)
SFP1 <391..479 CDD:227516 35/87 (40%)
C2H2 Zn finger 400..421 CDD:275368 9/20 (45%)
SUF4-like 403..>445 CDD:411020 17/41 (41%)
C2H2 Zn finger 403..421 CDD:411020 8/17 (47%)
C2H2 Zn finger 429..449 CDD:275368 9/19 (47%)
C2H2 Zn finger 457..477 CDD:275368 9/19 (47%)
C2H2 Zn finger 486..504 CDD:275368 7/17 (41%)
PTZ00121 <641..>728 CDD:173412 11/98 (11%)
COG5048 935..>1028 CDD:227381 36/83 (43%)
zf-C2H2 935..957 CDD:395048 9/21 (43%)
C2H2 Zn finger 937..957 CDD:275368 8/19 (42%)
zf-H2C2_2 949..973 CDD:404364 11/23 (48%)
C2H2 Zn finger 965..986 CDD:275368 8/20 (40%)
C2H2 Zn finger 994..1014 CDD:275368 6/19 (32%)
Zfp27NP_001032796.1 KRAB 2..37 CDD:366587
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..123
C2H2 Zn finger 152..171 CDD:275370
C2H2 Zn finger 179..199 CDD:275368 4/19 (21%)
C2H2 Zn finger 207..227 CDD:275368 3/20 (15%)
COG5048 <212..372 CDD:227381 51/164 (31%)
C2H2 Zn finger 235..255 CDD:275368 9/20 (45%)
C2H2 Zn finger 263..283 CDD:275368 9/19 (47%)
C2H2 Zn finger 291..311 CDD:275368 9/19 (47%)
COG5048 317..746 CDD:227381 102/573 (18%)
C2H2 Zn finger 319..339 CDD:275368 7/21 (33%)
C2H2 Zn finger 347..367 CDD:275368 2/19 (11%)
C2H2 Zn finger 403..423 CDD:275368 6/48 (13%)
C2H2 Zn finger 431..451 CDD:275368 4/41 (10%)
C2H2 Zn finger 459..479 CDD:275368 3/21 (14%)
C2H2 Zn finger 487..507 CDD:275368 8/29 (28%)
C2H2 Zn finger 515..535 CDD:275368 3/19 (16%)
C2H2 Zn finger 543..563 CDD:275368 2/19 (11%)
C2H2 Zn finger 571..591 CDD:275368 4/30 (13%)
C2H2 Zn finger 599..619 CDD:275368 2/19 (11%)
C2H2 Zn finger 627..647 CDD:275368 4/19 (21%)
C2H2 Zn finger 655..675 CDD:275368 5/25 (20%)
C2H2 Zn finger 683..703 CDD:275368 4/19 (21%)
C2H2 Zn finger 711..731 CDD:275368 8/19 (42%)
C2H2 Zn finger 739..759 CDD:275368 8/20 (40%)
zf-H2C2_2 752..775 CDD:372612 11/23 (48%)
C2H2 Zn finger 767..787 CDD:275368 6/19 (32%)
zf-H2C2_2 779..804 CDD:372612 5/12 (42%)
C2H2 Zn finger 795..815 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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