DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ham and Zfp2

DIOPT Version :9

Sequence 1:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster
Sequence 2:XP_030101795.1 Gene:Zfp2 / 22678 MGIID:99167 Length:494 Species:Mus musculus


Alignment Length:878 Identity:177/878 - (20%)
Similarity:251/878 - (28%) Gaps:402/878 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 CE--LDIRDSGGVYAKTPLQRGTRYGPFPMKLSHQPNDPQLAWKAHSRHYNGWLEPTEDVSTWLK 206
            ||  |:.|:|      ||....|...|:.:.:     |.:..|  ||.....|     |.:.|||
Mouse    11 CETKLETRES------TPKSTITGILPYGVIM-----DREDLW--HSALGAVW-----DPTCWLK 57

  Fly   207 KIRSVQDDCIGEANLQSYINAGYLWYETNRYVNAGSEMVVDGRPKSPVQLNEDFMNGGKVLAAAA 271
               ..|:..:|:..:                  |..|:           .||..:.||.      
Mouse    58 ---GQQERYLGQVTV------------------AQKEI-----------YNEKSVCGGN------ 84

  Fly   272 AAAAAVVAASSSGAKSGGGGSSAPSDDRSDRDNGSLYSGDEFSKDKKNSSLIREGDIDFTDDENG 336
                     ::..:.:.|...:.|........|.:.|..|    .|:||.|::..          
Mouse    85 ---------TTENSSTEGSMLNTPQSIPVTPCNWNSYRKD----SKQNSELMKTS---------- 126

  Fly   337 FDIRCEVCDKVYPDLDLLDDHLIGAHHFKQDEFPCKQCALRFCHRPLLIKHEAISHNNIRKYSCE 401
               |..|..|||                     .|.:|...|.....|:||:.| |...:.|:|.
Mouse   127 ---RMFVQKKVY---------------------GCDECGKTFRQSSSLLKHQRI-HTGEKPYTCN 166

  Fly   402 NCSKVFCDPSNLQRHIRAYHVGARCHPCPECGKTFGTSSGLKQHQHIHSSVKPFACEVCSKAYTQ 466
            .|.|.|.:.|:|..|.|. |.|.:.:.|.||||.|..|..|..||..|:..||:.|:.|.||:.:
Mouse   167 VCDKHFIERSSLTVHQRT-HTGEKPYKCHECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFRK 230

  Fly   467 FSNLCRHKRMHATCRMQIKCDKCNQSFSTLTSLTKHKKFCDSTGPGPYR-NQHVNRHHQHPHQHP 530
            .|:|.:|:|:| |.....||..|.::|:...:||.|::  ..||..||. ||             
Mouse   231 NSSLIQHERIH-TGEKPYKCHDCGKAFTQSMNLTVHQR--THTGEKPYECNQ------------- 279

  Fly   531 LPHQPHLAATATSTCPAPPRESSESSSSAAAAAVAAMSTPPNPFLMFRTAPSFFPGFPPYGFPPF 595
                                                                             
Mouse   280 ----------------------------------------------------------------- 279

  Fly   596 LPQNPLHPTNIPMFFSKNPMDLGCGGPEITSPVSAFDQKLPFGFLKGENSESQAYDKVTEKELVF 660
                                   ||        .||.|.:                     .|:.
Mouse   280 -----------------------CG--------KAFSQSM---------------------HLIV 292

  Fly   661 KAEEKLKKEPLVQAFEGEEDESRSSLDIKGKLEDTRNDSKSEEQDDMKQEPERVSTPDQQQAEDD 725
            .                                                  :|..|         
Mouse   293 H--------------------------------------------------QRSHT--------- 298

  Fly   726 RKSIDIMSTPPPADTPSGGDGPLDLSICRKRSAGSFFTAPAEDNLMLHRFMPRLHEFEAERGQPL 790
                              |:.|.:.|.|.|..:.|       ..|.||:   |.|..|    :|.
Mouse   299 ------------------GEKPYECSECGKAFSKS-------STLTLHQ---RNHTGE----KPY 331

  Fly   791 KMRKSHSSAESST----SQKSHKGSSPTPTPTASPGLTPSPSPPTSAGGELSSTSEGGAVPTMAA 851
            |..|...|...||    .|:.|.|..|...                               ....
Mouse   332 KCNKCGKSFSQSTYLIEHQRLHSGVKPFEC-------------------------------NQCG 365

  Fly   852 AAFAADHSALASGPTLPQTHPTFHPLLLEEIYRSGFPFLCQPGGRRGIEALLAGAASAAAPKRPL 916
            .||:.:.|.            |.|    ..|:....|:.|...|:.     ..|.:|        
Mouse   366 KAFSKNSSL------------TQH----RRIHTGEKPYECMICGKH-----FTGRSS-------- 401

  Fly   917 PPVKFSAGSVVGLKTKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYPCKYCDRAFSISSNLQRH 981
                .:...|:....|. |.|..|||.|.:||.|..|.|.||||:||.|..|.:||..:|:|..|
Mouse   402 ----LTVHQVIHTGEKP-YECTECGKAFSQSAYLIEHQRIHTGEKPYECDQCGKAFIKNSSLIVH 461

  Fly   982 VRNIHNKERPFRCELCDRSFGQQTNLDRHVKKH 1014
            .| ||..|:|::|..|.:||.:.|||.||.:.|
Mouse   462 QR-IHTGEKPYQCNECGKSFSRSTNLTRHQRTH 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978 22/110 (20%)
C2H2 Zn finger 341..363 CDD:275368 4/21 (19%)
C2H2 Zn finger 371..392 CDD:275368 7/20 (35%)
SFP1 <391..479 CDD:227516 34/87 (39%)
C2H2 Zn finger 400..421 CDD:275368 8/20 (40%)
SUF4-like 403..>445 CDD:411020 17/41 (41%)
C2H2 Zn finger 403..421 CDD:411020 7/17 (41%)
C2H2 Zn finger 429..449 CDD:275368 10/19 (53%)
C2H2 Zn finger 457..477 CDD:275368 8/19 (42%)
C2H2 Zn finger 486..504 CDD:275368 6/17 (35%)
PTZ00121 <641..>728 CDD:173412 3/86 (3%)
COG5048 935..>1028 CDD:227381 39/80 (49%)
zf-C2H2 935..957 CDD:395048 11/21 (52%)
C2H2 Zn finger 937..957 CDD:275368 10/19 (53%)
zf-H2C2_2 949..973 CDD:404364 12/23 (52%)
C2H2 Zn finger 965..986 CDD:275368 8/20 (40%)
C2H2 Zn finger 994..1014 CDD:275368 9/19 (47%)
Zfp2XP_030101795.1 COG5048 131..484 CDD:227381 134/665 (20%)
C2H2 Zn finger 137..157 CDD:275368 7/20 (35%)
C2H2 Zn finger 165..185 CDD:275368 8/20 (40%)
C2H2 Zn finger 193..213 CDD:275368 10/19 (53%)
C2H2 Zn finger 221..241 CDD:275368 8/19 (42%)
C2H2 Zn finger 249..269 CDD:275368 6/21 (29%)
C2H2 Zn finger 277..297 CDD:275368 9/199 (5%)
C2H2 Zn finger 305..325 CDD:275368 8/29 (28%)
C2H2 Zn finger 333..353 CDD:275368 5/19 (26%)
C2H2 Zn finger 361..381 CDD:275368 5/66 (8%)
C2H2 Zn finger 389..409 CDD:275368 5/36 (14%)
C2H2 Zn finger 417..437 CDD:275368 10/19 (53%)
C2H2 Zn finger 445..465 CDD:275368 8/20 (40%)
C2H2 Zn finger 473..493 CDD:275368 9/19 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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