DRSC/TRiP Functional Genomics Resources

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Protein Alignment ham and Klf10

DIOPT Version :9

Sequence 1:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster
Sequence 2:XP_036015210.1 Gene:Klf10 / 21847 MGIID:1101353 Length:547 Species:Mus musculus


Alignment Length:521 Identity:129/521 - (24%)
Similarity:180/521 - (34%) Gaps:150/521 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   549 PRESSESSSSAAAAAVAAMS-------------TPPNPFLMFRTAPSFFPGFPP-YGFPPFLPQN 599
            |.:.:|.|...|..|:.:||             .|..|........|..||.|. ...|.|....
Mouse    97 PWDKAEQSDFEAVEALMSMSCDWKSHFKKYLENRPVTPVSDTSEDDSLLPGTPDLQTVPAFCLTP 161

  Fly   600 PLHPTNIPMFFSKNPMDLGCGGPEITSPVSAFDQKLPFGFLKGENSESQAYDKVTEKELVFKAEE 664
            |..|::   |......:|....|......|..|...|.|                  ...||.||
Mouse   162 PYSPSD---FEPSQGSNLTASAPSTGHFKSFSDAAKPPG------------------ATPFKEEE 205

  Fly   665 K--LKKEPLVQA-----FEGEEDE---SRSSLDIK-----------------GKLEDTRNDSKSE 702
            |  |...||.:|     .....|.   :..|..:|                 |.:|.||      
Mouse   206 KNPLAAPPLPKAQATSVIRHTADAQLCNHQSCPVKAASILNYQDNSFRRRTHGNVEATR------ 264

  Fly   703 EQDDMKQEPERVSTPDQQQAEDDRKSIDIMSTPPPADTPSGGDGPLDLSICRKRSAGSF-FTAPA 766
                 |..|....:|::             |.|.|: |.|.||        .|..|..: |..|:
Mouse   265 -----KNIPCAAVSPNR-------------SKPEPS-TVSDGD--------EKAGAALYDFAVPS 302

  Fly   767 EDNLMLHRFMPRLHEFEAERGQPLKMRKSHSSAESSTSQKSHKGSSPTPTPTASPGLTPSP---- 827
            .:.::.             |.||         |.||..|||...||||   .::.|:.|.|    
Mouse   303 SETVIC-------------RSQP---------APSSPVQKSVLVSSPT---VSTGGVPPLPVICQ 342

  Fly   828 SPPTSAGGELSSTSEGGAVPTMAAAAFAADHSALASGPTLPQTHPTFHPLLLEEIYRSGFPFLCQ 892
            ..|..|...|.||......|:...|..:   ..|..|..:|:....|  ::.:.:.:|..|.:..
Mouse   343 MVPLPANNSLVSTVVPSTPPSQPPAVCS---PVLFMGTQVPEGTVVF--VVPQPVVQSPRPPVVS 402

  Fly   893 PGGRRGIEALLAGAASAAAPKRPLPPVKFSAGSVVGLKTKDR---YSCKF--CGKVFPRSANLTR 952
            |.|.|            .:|..|.|....||..|.......|   :.|..  |||.:.:|::|..
Mouse   403 PSGTR------------LSPIAPAPGFSPSAARVTPQIDSSRVRSHICSHPGCGKTYFKSSHLKA 455

  Fly   953 HLRTHTGEQPYPC--KYCDRAFSISSNLQRHVRNIHNKERPFRCELCDRSFGQQTNLDRHVKKHE 1015
            |:||||||:|:.|  |.|:|.|:.|..|.|| |..|..|:.|.|.:|||.|.:..:|.:|.::|.
Mouse   456 HVRTHTGEKPFSCSWKGCERRFARSDELSRH-RRTHTGEKKFACPMCDRRFMRSDHLTKHARRHL 519

  Fly  1016 S 1016
            |
Mouse   520 S 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978
C2H2 Zn finger 341..363 CDD:275368
C2H2 Zn finger 371..392 CDD:275368
SFP1 <391..479 CDD:227516
C2H2 Zn finger 400..421 CDD:275368
SUF4-like 403..>445 CDD:411020
C2H2 Zn finger 403..421 CDD:411020
C2H2 Zn finger 429..449 CDD:275368
C2H2 Zn finger 457..477 CDD:275368
C2H2 Zn finger 486..504 CDD:275368
PTZ00121 <641..>728 CDD:173412 19/113 (17%)
COG5048 935..>1028 CDD:227381 36/86 (42%)
zf-C2H2 935..957 CDD:395048 8/23 (35%)
C2H2 Zn finger 937..957 CDD:275368 8/21 (38%)
zf-H2C2_2 949..973 CDD:404364 13/25 (52%)
C2H2 Zn finger 965..986 CDD:275368 10/22 (45%)
C2H2 Zn finger 994..1014 CDD:275368 7/19 (37%)
Klf10XP_036015210.1 KLF10_N 101..436 CDD:409241 92/430 (21%)
COG5048 441..>491 CDD:227381 23/50 (46%)
C2H2 Zn finger 441..460 CDD:275368 7/18 (39%)
C2H2 Zn finger 468..490 CDD:275368 10/22 (45%)
zf-C2H2 496..518 CDD:395048 8/21 (38%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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