DRSC/TRiP Functional Genomics Resources

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Protein Alignment ham and Zfp729a

DIOPT Version :9

Sequence 1:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster
Sequence 2:NP_898969.2 Gene:Zfp729a / 212281 MGIID:3036250 Length:973 Species:Mus musculus


Alignment Length:788 Identity:182/788 - (23%)
Similarity:285/788 - (36%) Gaps:230/788 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 NSSLIREGDIDFTDDENGFDIRCEVCDKVYPDLDLLDDHLIGAHHFKQDEFPCKQCALRF----- 378
            |...|..|:..|         :||||.|.:..|.||..|.|  .|.:::.:.|:.|...|     
Mouse   304 NHKKIHSGEKPF---------KCEVCGKAFRILSLLSKHKI--IHTEENPYKCEVCGKAFDYPSR 357

  Fly   379 ------------------CHRPL-----LIKHEAISHNNIRKYSCENCSKVFCDPSNLQRHIR-- 418
                              |.:..     |.||:.| |.....|:.|.|.|.|..||.|.:|.|  
Mouse   358 LSTHAKMHTGEKPYKCEVCQKAFRSLSSLSKHKRI-HTEDNYYNNELCGKAFIYPSRLSKHKRIC 421

  Fly   419 -------------AYHV------------GARCHPCPECGKTFGTSSGLKQHQHIHSSVKPFACE 458
                         |:||            |.:.:.|..|||.|...|.|..|:.||:..|||.||
Mouse   422 AGEKPYKCEVCGKAFHVSSLLSKHRTIHTGEKLYKCEVCGKAFYYPSRLSNHKKIHTGEKPFQCE 486

  Fly   459 VCSKAYTQFSNLCRHKRMHATCRMQIKCDKCNQSFSTLTSLTKHKKFCDSTGPGPYRNQHVNRHH 523
            ||.||:...|:|.:|||:| |.....||.:|.::|.:|:||:|||:.  .||..||:.:...:..
Mouse   487 VCGKAFCFPSSLSKHKRIH-TGEKPYKCKECGKAFRSLSSLSKHKRI--HTGEKPYKCEECGKAF 548

  Fly   524 QHP---HQHPLPH---QPHLAATATSTCPAPPRESSESSSSAAAAAVAAMSTPPNPFLMFRTAPS 582
            .:|   .:|.:.|   :|:...........|.:.|...          .:.|...|:.......:
Mouse   549 HYPSLLSKHKIIHTEEKPYKCDVCGQAFHVPSKLSHHK----------IIHTGEKPYKCEVCGKA 603

  Fly   583 FFPGFPPYGFPPFLPQNPLHPTNIPMFFSK--------NPMDLGCGGPEITSPVSAFDQKLPFGF 639
            |.                     ||:..||        ||.:     .::.|....:..||    
Mouse   604 FC---------------------IPLLLSKHKRVHTGENPYN-----SQVCSKAFVYPSKL---- 638

  Fly   640 LKGENSESQAYDKVTEKELVFKAE---EKLKKEPLVQAFEGEEDESRSSLDIKGKLEDTRNDSKS 701
                    ..:.||..||..:|.|   :..:...|:...:|.....:..     |.||.   .|:
Mouse   639 --------SKHKKVRTKEKPYKCEVCGKAFRFPSLLLIHKGMHTGEKPY-----KCEDC---GKA 687

  Fly   702 EEQDDMKQEPERVSTPDQQQAEDDRKSIDIMSTPPPADTPSGGDGPLDLSICRKRSAGSFFTAPA 766
            .....:..:.:|:.|                           |:.|....:|.|    .|..:  
Mouse   688 FHYPSLLSKHKRIHT---------------------------GEKPYQCEVCGK----DFHVS-- 719

  Fly   767 EDNLMLHRFMPRLHEFEAERGQPLKM----RKSHSSAESSTSQKSHKGSSPTPTPTASPGLTPSP 827
             .:|..||.   :|..|    :|.|.    :....|:..|..:::|.|..|..........   .
Mouse   720 -SSLSKHRI---IHTGE----KPYKCEICGKTFRFSSSLSKHKRNHTGKKPYKCEECGKAF---H 773

  Fly   828 SPPTSAGGELSSTSEGGAVPTMAAAAF-----AADHSALASGPTLPQTH------PTFH-PLLL- 879
            .|...|..::|.|.|......:...||     .:.|..:.:|   .:.|      ..|| |..| 
Mouse   774 FPSILAKHKISHTGEKPYNCDLCGKAFHYASLLSKHKMIHTG---EKPHKCDICGKAFHYPSKLS 835

  Fly   880 --EEIYRSGFPFLCQPGGRRGIEALLAGAASAAAPKRPLPPVKFSAGSVVGLKT-KDRYSCKFCG 941
              ::|:....|:.|:..|.     :...|:|.:..||              :.| ::.|.|:.||
Mouse   836 NHKKIHTGEKPYKCEVCGN-----VFCFASSLSKHKR--------------IHTGENPYKCEVCG 881

  Fly   942 KVFPRSANLTRHLRTHTGEQPYPCKYCDRAFSISSNLQRHVRNIHNKERPFRCELCDRSFGQQTN 1006
            |.|...:.|::|...||||:||.|..|.:||...|.|.:| :.||..::|::||:|.::|...:.
Mouse   882 KAFYYPSLLSKHKIIHTGEKPYKCDLCGKAFHYPSLLSKH-KVIHTGKKPYKCEVCGKAFHYPSR 945

  Fly  1007 LDRHVKKH 1014
            |.:|.|.|
Mouse   946 LSKHKKIH 953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978
C2H2 Zn finger 341..363 CDD:275368 10/21 (48%)
C2H2 Zn finger 371..392 CDD:275368 8/48 (17%)
SFP1 <391..479 CDD:227516 40/114 (35%)
C2H2 Zn finger 400..421 CDD:275368 10/35 (29%)
SUF4-like 403..>445 CDD:411020 19/68 (28%)
C2H2 Zn finger 403..421 CDD:411020 9/32 (28%)
C2H2 Zn finger 429..449 CDD:275368 8/19 (42%)
C2H2 Zn finger 457..477 CDD:275368 11/19 (58%)
C2H2 Zn finger 486..504 CDD:275368 8/17 (47%)
PTZ00121 <641..>728 CDD:173412 14/89 (16%)
COG5048 935..>1028 CDD:227381 32/80 (40%)
zf-C2H2 935..957 CDD:395048 8/21 (38%)
C2H2 Zn finger 937..957 CDD:275368 7/19 (37%)
zf-H2C2_2 949..973 CDD:404364 11/23 (48%)
C2H2 Zn finger 965..986 CDD:275368 7/20 (35%)
C2H2 Zn finger 994..1014 CDD:275368 7/19 (37%)
Zfp729aNP_898969.2 KRAB 15..73 CDD:214630
KRAB 15..54 CDD:279668
C2H2 Zn finger 93..110 CDD:275368
C2H2 Zn finger 121..141 CDD:275368
C2H2 Zn finger 149..169 CDD:275368
C2H2 Zn finger 177..197 CDD:275368
zf-H2C2_2 190..213 CDD:290200
C2H2 Zn finger 205..225 CDD:275368
zf-H2C2_2 218..242 CDD:290200
COG5048 229..670 CDD:227381 103/428 (24%)
C2H2 Zn finger 233..253 CDD:275368
zf-H2C2_2 246..269 CDD:290200
C2H2 Zn finger 261..281 CDD:275368
C2H2 Zn finger 289..309 CDD:275368 1/4 (25%)
zf-H2C2_2 302..324 CDD:290200 9/28 (32%)
C2H2 Zn finger 317..337 CDD:275368 10/21 (48%)
C2H2 Zn finger 345..365 CDD:275368 3/19 (16%)
C2H2 Zn finger 373..393 CDD:275368 5/20 (25%)
C2H2 Zn finger 404..421 CDD:275368 8/16 (50%)
C2H2 Zn finger 429..449 CDD:275368 3/19 (16%)
C2H2 Zn finger 457..477 CDD:275368 8/19 (42%)
zf-H2C2_2 470..492 CDD:290200 12/21 (57%)
C2H2 Zn finger 485..505 CDD:275368 11/19 (58%)
zf-H2C2_2 497..522 CDD:290200 10/25 (40%)
COG5048 509..951 CDD:227381 116/566 (20%)
C2H2 Zn finger 513..533 CDD:275368 9/21 (43%)
zf-H2C2_2 525..550 CDD:290200 9/26 (35%)
C2H2 Zn finger 541..561 CDD:275368 2/19 (11%)
C2H2 Zn finger 569..589 CDD:275368 2/29 (7%)
C2H2 Zn finger 597..617 CDD:275368 5/40 (13%)
C2H2 Zn finger 626..645 CDD:275368 4/30 (13%)
C2H2 Zn finger 653..673 CDD:275368 3/19 (16%)
C2H2 Zn finger 681..701 CDD:275368 4/22 (18%)
zf-H2C2_2 694..717 CDD:290200 6/53 (11%)
C2H2 Zn finger 709..729 CDD:275368 6/29 (21%)
zf-H2C2_2 721..744 CDD:290200 7/29 (24%)
C2H2 Zn finger 737..757 CDD:275368 2/19 (11%)
zf-H2C2_2 749..773 CDD:290200 4/26 (15%)
C2H2 Zn finger 765..785 CDD:275368 2/22 (9%)
C2H2 Zn finger 793..813 CDD:275368 3/19 (16%)
zf-H2C2_2 806..830 CDD:290200 4/26 (15%)
C2H2 Zn finger 821..841 CDD:275368 4/19 (21%)
C2H2 Zn finger 849..869 CDD:275368 6/38 (16%)
zf-H2C2_2 861..886 CDD:290200 10/38 (26%)
C2H2 Zn finger 877..897 CDD:275368 7/19 (37%)
zf-H2C2_2 890..914 CDD:290200 12/23 (52%)
C2H2 Zn finger 905..925 CDD:275368 7/20 (35%)
C2H2 Zn finger 933..953 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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