Protein Alignment ham and Y56A3A.28

DIOPT Version :10

• Sequence 1: NP_724130.4
• Gene: ham / 35135
• FlyBaseID: FBgn0045852
• Length: 1108
• Species: Drosophila melanogaster
• Sequence 2: NP_001366955.1
• Gene: Y56A3A.28 / 176632
• WormBaseID: WBGene00013240
• Length: 386
• Species: Caenorhabditis elegans
• Alignment Length: 352
• Identity: 89/352 - (25%)
• Similarity: 126/352 - (35%)
• Gaps: 81/352 - (23%)

  Fly   753 CRK--RSAGSFFTAPAEDNLMLHRFMPRLHEFEAE------RGQPLKMRKSHSSAESSTSQKS-- 807
            |||  |:...|:. ..||.||        ..||.|      ||....:.::....:...|:::
 Worm    24 CRKYFRNKREFYW-HTEDCLM--------EAFEREVALSVSRGADEDIAENEEEWDDQPSEEALG 79

  Fly   808 ---------HKGSSPTPTPTASPGLTPSPSPPTSAGGE--LSSTSEGG----AVPTMAAAAFAAD 857
                     .|...|.|.|.:      ||..|..|..|  :.:...|.    :|.....|.|.:|
 Worm    80 LIAKNEASPSKQQQPPPPPKS------SPRKPEKAQKEEKVIAGPRGSQIIVSVEPQVEAGFQSD 138

  Fly   858 HSALASGPTL-PQTHPTFHPLLLEEIYRSGFPFLCQPGGRRGIEALLAGAASAAAPKRPLPPVKF 921
            ....:..|.| .|.......:..|:|           |.....|..:.|.......:.||..:
 Worm   139 DDDDSEPPLLVSQVEQEKEDINEEDI-----------GNNDDEEEEMEGDLEYGDEETPLSFI-- 190

  Fly   922 SAGSVVGLK------TKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYPCKYCDRAFSISSNLQR 980
            .:|:|||..      :|.:..|..||.|..|. |...|.|.|||||||.|.||.:.|..:|:|:.
 Worm   191 PSGTVVGAPANQDDGSKPKMECPTCGLVLYRH-NFAAHFRIHTGEQPYGCDYCGKRFRTTSSLKV 254

  Fly   981 HVRNIHNKERPFRCELCDRSFGQQTNLDRHVKKHESEGNNFRDSPSSSGIAEREEYFDDIRKFMN 1045
            |.| .|..|:|:.|..||.....:.|||||:..|     :.|::.....|..|......
 Worm   255 HKR-AHTGEKPYVCPSCDYRTITKRNLDRHIVNH-----HIRNAVIKGPIMRRSRTIPR------ 307

  Fly  1046 RVYTPNSLAGNEGDTEEYPNSDDQSVN 1072
              |.|      |...|..|.:...:||
 Worm   308 --YHP------EDQVESIPTTMKYTVN 326

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ham	NP_724130.4	PR-SET_ZFPM	131..253	CDD:380978
		C2H2 Zn finger	341..363	CDD:275368
		C2H2 Zn finger	371..392	CDD:275368
		SFP1	<391..479	CDD:227516
		C2H2 Zn finger	400..421	CDD:275368
		SUF4-like	403..>445	CDD:411020
		C2H2 Zn finger	403..421	CDD:411020
		C2H2 Zn finger	429..449	CDD:275368
		C2H2 Zn finger	457..477	CDD:275368
		C2H2 Zn finger	486..504	CDD:275368
		PTZ00121	<641..>728	CDD:173412
		COG5048	935..>1028	CDD:227381	36/92 (39%)
		zf-C2H2	935..957	CDD:395048	8/21 (38%)
		C2H2 Zn finger	937..957	CDD:275368	8/19 (42%)
		zf-H2C2_2	949..973	CDD:463886	13/23 (57%)
		C2H2 Zn finger	965..986	CDD:275368	8/20 (40%)
		C2H2 Zn finger	994..1014	CDD:275368	8/19 (42%)
Y56A3A.28	NP_001366955.1	C2H2 Zn finger	212..231	CDD:275368	8/19 (42%)
		zf-H2C2_2	223..248	CDD:463886	14/24 (58%)
		C2H2 Zn finger	239..259	CDD:275368	8/20 (40%)
		zf-H2C2_2	251..276	CDD:463886	9/25 (36%)
		C2H2 Zn finger	267..287	CDD:275368	8/19 (42%)