DRSC/TRiP Functional Genomics Resources

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Protein Alignment ham and Zfp617

DIOPT Version :9

Sequence 1:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster
Sequence 2:NP_579936.2 Gene:Zfp617 / 170938 MGIID:2684459 Length:559 Species:Mus musculus


Alignment Length:660 Identity:139/660 - (21%)
Similarity:219/660 - (33%) Gaps:279/660 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   365 KQDEFPCKQCALRFCHRPLLIKHEAISHNNIRKYSCENCSKVFCDPSNLQRHIRAYHVGARCHPC 429
            ::..:.||||...|.:...|..|:.| ||..|.::|:.|.|.|...||:|.|.| .|.|.:.:.|
Mouse   163 QEKPYACKQCDKAFKYLSSLQNHKRI-HNRERNHACKQCGKSFKRQSNVQAHER-NHTGEKPYVC 225

  Fly   430 PECGKTFGTSSGLKQHQHIHSSVKPFACEVCSKAYTQFSNLCRHKRMHATCRMQIKCDKCNQSFS 494
            ..|||.:.:.|.|:.|:..|:..||:.|:.|.||||.:|.|..|:|.| |......|..|.::::
Mouse   226 KHCGKAYTSYSTLRAHERSHTGEKPYVCKHCGKAYTSYSTLRAHERSH-TGEKPYVCKHCGKAYT 289

  Fly   495 TLTSLTKHKKFCDSTGPGPYRNQHVNRHHQHPHQHPLPHQPHLAATATSTCPAPPRESSESSSSA 559
            |..:|..|::  ..||..||..:|..:                |.|:.||..|..|..:      
Mouse   290 TYNTLRAHER--SHTGEKPYVCKHCGK----------------AYTSYSTLRAHERSHT------ 330

  Fly   560 AAAAVAAMSTPPNPFLMFRTAPSFFPGFPPYGFPPFLPQNPLHPTNIPMFFSKNPMDLGCGGPEI 624
                                           |..|::.::                   ||    
Mouse   331 -------------------------------GEKPYVCKH-------------------CG---- 341

  Fly   625 TSPVSAFDQKLPFGFLKGENSESQAYDKVTEKELVFKAEEKLKKEPLVQAFEGEEDESRSSLDIK 689
                .||.|              .:|.::                                    
Mouse   342 ----KAFTQ--------------SSYLRI------------------------------------ 352

  Fly   690 GKLEDTRNDSKSEEQDDMKQEPERVSTPDQQQAEDDRKSIDIMSTPPPADTPSGGDGPLDLSICR 754
                                 .:|..|                           |:.|.....|.
Mouse   353 ---------------------HKRTHT---------------------------GEKPYICKQCG 369

  Fly   755 KRSAGSFFTAPAEDNLMLHRFMPRLHEFEAERGQPLKMRK-SHSSAESS---TSQKSHKGSSPTP 815
            |..|.|       .:|.:|:   |.|..|    :|...:: ..:.|:||   ..|:||.|..|..
Mouse   370 KAFARS-------SHLQIHK---RSHTGE----KPYVCKQCGKAFAQSSYLHIHQRSHTGEKPYV 420

  Fly   816 TPTASPGLTPSPSPPTSAGGELSSTSEGGAVPTMAAAAFAADHSALASGPTLPQTHPTFHPLLLE 880
            ........|.|                                           :|     |.:.
Mouse   421 CKQCGKAFTRS-------------------------------------------SH-----LQIH 437

  Fly   881 EIYRSG-FPFLCQPGGRRGIEALLAGAASAAAPKRPLPPVKFSAGSVVGLKTK-----DRYSCKF 939
            :|..:| .|:.|:          |.|.|             |:..:.:.:..:     ..|.||.
Mouse   438 KITHTGEKPYSCK----------LCGKA-------------FTHSNYLQIHKRIHTGEKPYVCKE 479

  Fly   940 CGKVFPRSANLTRHLRTHTGEQPYPCKYCDRAFSISSNLQRHVRNIHNKERPFRCELCDRSFGQQ 1004
            |||.|.||.:|..|..||:||:||.||.|.:||::||:|:|| ..:|::|:|:.|:.|.::||..
Mouse   480 CGKAFARSTSLHIHEGTHSGEKPYVCKQCGKAFTLSSSLRRH-DVVHSEEKPYICKCCGKTFGCY 543

  Fly  1005 TNLDRHVKKH 1014
            :::.:|.|.|
Mouse   544 SSVQKHEKTH 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978
C2H2 Zn finger 341..363 CDD:275368
C2H2 Zn finger 371..392 CDD:275368 8/20 (40%)
SFP1 <391..479 CDD:227516 35/87 (40%)
C2H2 Zn finger 400..421 CDD:275368 9/20 (45%)
SUF4-like 403..>445 CDD:411020 16/41 (39%)
C2H2 Zn finger 403..421 CDD:411020 8/17 (47%)
C2H2 Zn finger 429..449 CDD:275368 7/19 (37%)
C2H2 Zn finger 457..477 CDD:275368 10/19 (53%)
C2H2 Zn finger 486..504 CDD:275368 5/17 (29%)
PTZ00121 <641..>728 CDD:173412 3/86 (3%)
COG5048 935..>1028 CDD:227381 37/80 (46%)
zf-C2H2 935..957 CDD:395048 11/21 (52%)
C2H2 Zn finger 937..957 CDD:275368 10/19 (53%)
zf-H2C2_2 949..973 CDD:404364 12/23 (52%)
C2H2 Zn finger 965..986 CDD:275368 10/20 (50%)
C2H2 Zn finger 994..1014 CDD:275368 6/19 (32%)
Zfp617NP_579936.2 KRAB 4..>47 CDD:214630
KRAB 4..40 CDD:279668
C2H2 Zn finger 141..161 CDD:275368
COG5048 156..542 CDD:227381 135/647 (21%)
C2H2 Zn finger 169..189 CDD:275368 8/20 (40%)
C2H2 Zn finger 197..217 CDD:275368 9/20 (45%)
zf-H2C2_2 209..234 CDD:290200 10/25 (40%)
C2H2 Zn finger 225..245 CDD:275368 7/19 (37%)
zf-H2C2_2 238..262 CDD:290200 10/23 (43%)
C2H2 Zn finger 253..273 CDD:275368 10/19 (53%)
zf-H2C2_2 266..290 CDD:290200 7/24 (29%)
C2H2 Zn finger 281..301 CDD:275368 5/21 (24%)
zf-H2C2_2 294..318 CDD:290200 8/41 (20%)
C2H2 Zn finger 309..329 CDD:275368 7/35 (20%)
zf-H2C2_2 322..346 CDD:290200 8/87 (9%)
C2H2 Zn finger 337..357 CDD:275368 7/117 (6%)
zf-H2C2_2 349..374 CDD:290200 7/108 (6%)
C2H2 Zn finger 365..385 CDD:275368 7/29 (24%)
zf-H2C2_2 377..402 CDD:290200 6/31 (19%)
C2H2 Zn finger 393..413 CDD:275368 4/19 (21%)
zf-H2C2_2 409..430 CDD:290200 5/20 (25%)
C2H2 Zn finger 421..441 CDD:275368 5/67 (7%)
zf-H2C2_2 433..458 CDD:290200 10/52 (19%)
C2H2 Zn finger 449..469 CDD:275368 5/42 (12%)
zf-H2C2_2 461..486 CDD:290200 7/24 (29%)
C2H2 Zn finger 477..497 CDD:275368 10/19 (53%)
C2H2 Zn finger 505..525 CDD:275368 10/20 (50%)
C2H2 Zn finger 533..553 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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