DRSC/TRiP Functional Genomics Resources

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Protein Alignment ham and ZNF234

DIOPT Version :9

Sequence 1:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster
Sequence 2:NP_001138296.1 Gene:ZNF234 / 10780 HGNCID:13027 Length:700 Species:Homo sapiens


Alignment Length:773 Identity:177/773 - (22%)
Similarity:251/773 - (32%) Gaps:271/773 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 YSGDEFSK---DKKNSSL---IREGDIDFTDDENGFDI-------------------RCEVCDKV 347
            |..||:.|   |..|..|   :..|:...|.||.|...                   :|:||.|.
Human   148 YQCDEYKKSFTDVFNFDLHQQLHSGEKSHTCDECGKSFCYISALHIHQRVHMGEKCYKCDVCGKE 212

  Fly   348 YPDLDLLDDHLIGAHHFKQDEFPCKQCALRFCHRPLLIKHEAISHNNIRKYSCENCSKVFCDPSN 412
            :.....|..|  ...|..:..|.|.:|...|..|..|..|..: |:..:.|:||.|.:.|...|:
Human   213 FSQSSHLQTH--QRVHTVEKPFKCVECGKGFSRRSTLTVHCKL-HSGEKPYNCEECGRAFIHASH 274

  Fly   413 LQRHIRAYHVGARCHPCPECGKTFGTSSGLKQHQHIHSSVKPFACEVCSKAYTQFSNLCRHKRMH 477
            ||.|.| .|.|.:...|..|||.|...|.|..|..:|:..||:.||.|.|.:|..|||..|:|:|
Human   275 LQEHQR-IHTGEKPFKCDTCGKNFRRRSALNNHCMVHTGEKPYKCEDCGKCFTCSSNLRIHQRVH 338

  Fly   478 ATCRMQIKCDKCNQSFSTLTSLTKHKKFCDSTGPGPYRNQHVNRHHQHPHQHPLPHQPHLAATAT 542
             |.....||::|.:.|...:....|::.  .||..||                            
Human   339 -TGEKPYKCEECGKCFIQPSQFQAHRRI--HTGEKPY---------------------------- 372

  Fly   543 STCPAPPRESSESSSSAAAAAVAAMSTPPNPFLMFRTAPSFFPGFPPYGFPPFLPQNPLH-PTNI 606
             .|....:....|||..|...|   .|...|:.......||              :..:| ..::
Human   373 -VCKVCGKGFIYSSSFQAHQGV---HTGEKPYKCNECGKSF--------------RMKIHYQVHL 419

  Fly   607 PMFFSKNPMDLG-CGGPEITSPVSAFDQKLPFGFLKGENSESQAYDKVTEKELVFKAEEKLKKEP 670
            .:...:.|.... ||        .||.|.   .:||       .:.|....:..||.||.     
Human   420 VVHTGEKPYKCEVCG--------KAFRQS---SYLK-------IHLKAHSVQKPFKCEEC----- 461

  Fly   671 LVQAFEGEEDESRSSLDIKGKLEDTRNDSKSEE-------QDDMKQEPERVSTPDQQQAEDDRKS 728
                  |:.....|.|.|...:.......|.||       :.|:|... |:.|            
Human   462 ------GQGFNQSSRLQIHQLIHTGEKPYKCEECGKGFSRRADLKIHC-RIHT------------ 507

  Fly   729 IDIMSTPPPADTPSGGDGPLDLSICRKRSAGSFFTAPAEDNLMLHRFMPRLHEFEAERGQPLKMR 793
                           |:.|.:...|     |..|:..:  :|:.|:   |:|..|    :|.|..
Human   508 ---------------GEKPYNCEEC-----GKVFSQAS--HLLTHQ---RVHSGE----KPFKCE 543

  Fly   794 ---KSHS-SAESSTSQKSHKGSSPTPTPTASPGLTPSPSPPTSAGGELSSTSEGGAVPTMAAAAF 854
               ||.| ||.....||.|.|..|                                         
Human   544 ECGKSFSRSAHLQAHQKVHTGEKP----------------------------------------- 567

  Fly   855 AADHSALASGPTLPQTHPTFHPLLLEEIYRSGFPFLCQPGGRRGIEALLAGAASAAAPKRPLPPV 919
                                        |:.|   .|..|                        .
Human   568 ----------------------------YKCG---ECGKG------------------------F 577

  Fly   920 KFSAGSVVGLKTKDR-------YSCKFCGKVFPRSANLTRHLRTHTGEQPYPCKYCDRAFSISSN 977
            |:|    :.|....|       |:|..|||.|.::::|..|...||||:||.|..|.:.||.||.
Human   578 KWS----LNLDMHQRVHTGEKPYTCGECGKHFSQASSLQLHQSVHTGEKPYKCDVCGKVFSRSSQ 638

  Fly   978 LQRHVRNIHNKERPFRCELCDRSFGQQTNLDRHVKKHESEGNNFRDSPSSSGIAEREE 1035
            ||.| |.:|..|:|::||:|.:.|..::||..|.|.| :.|..:.:..:|..|.|..|
Human   639 LQYH-RRVHTGEKPYKCEICGKRFSWRSNLVSHHKIH-AAGTFYENDENSKNIRELSE 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978
C2H2 Zn finger 341..363 CDD:275368 6/21 (29%)
C2H2 Zn finger 371..392 CDD:275368 6/20 (30%)
SFP1 <391..479 CDD:227516 35/87 (40%)
C2H2 Zn finger 400..421 CDD:275368 9/20 (45%)
SUF4-like 403..>445 CDD:411020 16/41 (39%)
C2H2 Zn finger 403..421 CDD:411020 7/17 (41%)
C2H2 Zn finger 429..449 CDD:275368 8/19 (42%)
C2H2 Zn finger 457..477 CDD:275368 10/19 (53%)
C2H2 Zn finger 486..504 CDD:275368 4/17 (24%)
PTZ00121 <641..>728 CDD:173412 17/93 (18%)
COG5048 935..>1028 CDD:227381 37/92 (40%)
zf-C2H2 935..957 CDD:395048 8/21 (38%)
C2H2 Zn finger 937..957 CDD:275368 7/19 (37%)
zf-H2C2_2 949..973 CDD:404364 10/23 (43%)
C2H2 Zn finger 965..986 CDD:275368 10/20 (50%)
C2H2 Zn finger 994..1014 CDD:275368 8/19 (42%)
ZNF234NP_001138296.1 KRAB 8..65 CDD:214630
KRAB 8..47 CDD:279668
KRNB 91..147
COG5048 <101..306 CDD:227381 46/161 (29%)
C2H2 Zn finger 150..170 CDD:275368 6/19 (32%)
C2H2 Zn finger 178..198 CDD:275368 3/19 (16%)
zf-C2H2 204..226 CDD:278523 6/23 (26%)
C2H2 Zn finger 206..226 CDD:275368 6/21 (29%)
zf-H2C2_2 218..243 CDD:290200 7/26 (27%)
C2H2 Zn finger 234..254 CDD:275368 6/20 (30%)
COG5048 258..672 CDD:227381 143/635 (23%)
C2H2 Zn finger 262..282 CDD:275368 9/20 (45%)
zf-H2C2_2 274..299 CDD:290200 11/25 (44%)
C2H2 Zn finger 290..310 CDD:275368 8/19 (42%)
C2H2 Zn finger 318..338 CDD:275368 10/19 (53%)
zf-H2C2_2 330..355 CDD:290200 10/25 (40%)
C2H2 Zn finger 346..366 CDD:275368 4/21 (19%)
zf-H2C2_2 359..383 CDD:290200 6/54 (11%)
C2H2 Zn finger 374..394 CDD:275368 6/22 (27%)
C2H2 Zn finger 402..422 CDD:275368 3/33 (9%)
zf-H2C2_2 414..439 CDD:290200 6/32 (19%)
C2H2 Zn finger 430..450 CDD:275368 8/37 (22%)
C2H2 Zn finger 458..478 CDD:275368 6/30 (20%)
zf-H2C2_2 471..495 CDD:290200 5/23 (22%)
C2H2 Zn finger 486..506 CDD:275368 5/20 (25%)
zf-H2C2_2 498..523 CDD:290200 9/57 (16%)
C2H2 Zn finger 514..534 CDD:275368 6/29 (21%)
zf-H2C2_2 526..551 CDD:290200 9/31 (29%)
C2H2 Zn finger 542..562 CDD:275368 7/19 (37%)
zf-H2C2_2 554..578 CDD:290200 9/119 (8%)
C2H2 Zn finger 570..590 CDD:275368 7/50 (14%)
zf-H2C2_2 582..607 CDD:290200 8/24 (33%)
C2H2 Zn finger 598..618 CDD:275368 7/19 (37%)
zf-H2C2_2 610..635 CDD:290200 11/24 (46%)
C2H2 Zn finger 626..646 CDD:275368 10/20 (50%)
zf-H2C2_2 639..662 CDD:290200 10/23 (43%)
C2H2 Zn finger 654..674 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

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