DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10348 and ZNF671

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_079109.2 Gene:ZNF671 / 79891 HGNCID:26279 Length:534 Species:Homo sapiens


Alignment Length:133 Identity:43/133 - (32%)
Similarity:58/133 - (43%) Gaps:33/133 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 YTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVR---------------- 359
            |.|..|||.|.|...|..|.||||||:||:|..|.::||.||:|..|.|                
Human   397 YVCSECGKEFSRKHTLVLHQRTHTGERPYECSECGKAFSQSSHLNVHWRIHSSDYECSRCGKAFS 461

  Fly   360 ---------NIHNKERPFKCEICERCFGQQTNLDRHLKKHESDAVSLSALSGVSERMHCIRRFCE 415
                     .:|:.|:|::|..|.:.|.|:.||.||.|.|..:...:.:        .|.|.|..
Human   462 CISKLIQHQKVHSGEKPYECSKCGKAFTQRPNLIRHWKVHTGERPYVCS--------ECGREFIR 518

  Fly   416 NPT 418
            ..|
Human   519 KQT 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 26/76 (34%)
zf-C2H2 311..333 CDD:278523 10/21 (48%)
C2H2 Zn finger 313..333 CDD:275368 9/19 (47%)
zf-H2C2_2 325..349 CDD:290200 12/23 (52%)
C2H2 Zn finger 341..362 CDD:275368 9/45 (20%)
zf-H2C2_2 353..377 CDD:290200 8/48 (17%)
zf-C2H2 368..390 CDD:278523 9/21 (43%)
C2H2 Zn finger 370..390 CDD:275368 9/19 (47%)
ZNF671NP_079109.2 KRAB 49..109 CDD:214630
KRAB 49..88 CDD:279668
C2H2 Zn finger 243..269 CDD:275368
COG5048 <285..443 CDD:227381 24/45 (53%)
zf-C2H2 285..307 CDD:278523
C2H2 Zn finger 287..307 CDD:275368
zf-H2C2_2 300..324 CDD:290200
C2H2 Zn finger 315..335 CDD:275368
zf-H2C2_2 327..352 CDD:290200
C2H2 Zn finger 343..363 CDD:275368
zf-C2H2 369..391 CDD:278523
C2H2 Zn finger 371..391 CDD:275368
zf-C2H2 397..419 CDD:278523 10/21 (48%)
C2H2 Zn finger 399..419 CDD:275368 9/19 (47%)
zf-H2C2_2 412..436 CDD:290200 13/23 (57%)
C2H2 Zn finger 427..447 CDD:275368 9/19 (47%)
C2H2 Zn finger 453..473 CDD:275368 0/19 (0%)
zf-H2C2_2 466..490 CDD:290200 6/23 (26%)
C2H2 Zn finger 481..501 CDD:275368 9/19 (47%)
C2H2 Zn finger 509..529 CDD:275368 4/21 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.