DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10348 and ZNF184

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001305820.1 Gene:ZNF184 / 7738 HGNCID:12975 Length:751 Species:Homo sapiens


Alignment Length:606 Identity:125/606 - (20%)
Similarity:201/606 - (33%) Gaps:178/606 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 GRLQHQHSHQQ---------HQTLNHHAKGKRRSSFDQPLDLRLAHKRKTDLVDQGPMEDE---- 115
            |.|:.|.::||         .:|:....||...:.|.:.:::      .::||.|.|..:|    
Human   148 GSLERQQANQQTLPKEIKVTEKTIPSWEKGPVNNEFGKSVNV------SSNLVTQEPSPEETSTK 206

  Fly   116 -----NSNLIMFASELAVAQQKEKELNNNHIAASLA-----------------------DLGFDM 152
                 |||.:          :|||....|....:.:                       :..|..
Human   207 RSIKQNSNPV----------KKEKSCKCNECGKAFSYCSALIRHQRTHTGEKPYKCNECEKAFSR 261

  Fly   153 SRKMLRALR-----------EGGAGGGGGGGGGGGGGGGPPNAPPLTPPQCSIPAVHPTLLEAMT 206
            |..::...|           :.|.|...|              |.||..|.......|...:...
Human   262 SENLINHQRIHTGDKPYKCDQCGKGFIEG--------------PSLTQHQRIHTGEKPYKCDECG 312

  Fly   207 KNLP-----LQYRNVFAGVLPGKVNSPAASSSPTG----------ADFPFRHPLKKCELTWPPPT 256
            |...     :|::.:..|..|...|....:.|..|          .:.||:  ..:|:.|:...|
Human   313 KAFSQRTHLVQHQRIHTGEKPYTCNECGKAFSQRGHFMEHQKIHTGEKPFK--CDECDKTFTRST 375

  Fly   257 EQLQLELPHPNPKL-------------SPVLPHPQL----QDYQTRRKNKARTAATGGNATPNLP 304
            ...|.:..|...|.             |..:.|..:    :.|:.....||.:..:      ||.
Human   376 HLTQHQKIHTGEKTYKCNECGKAFNGPSTFIRHHMIHTGEKPYECNECGKAFSQHS------NLT 434

  Fly   305 QRNKDR-----YTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNK 364
            |..|..     |.|..|||.|...::|.:||:.||||:||||..|.::||..|:|.:| |.||.:
Human   435 QHQKTHTGEKPYDCAECGKSFSYWSSLAQHLKIHTGEKPYKCNECGKAFSYCSSLTQH-RRIHTR 498

  Fly   365 ERPFKCEICERCFGQQTNLDRHLKKHESD----------AVSLSALSGVSERMH----------C 409
            |:||:|..|.:.|...:||::|.|.|..:          |...|:.....||:|          |
Human   499 EKPFECSECGKAFSYLSNLNQHQKTHTQEKAYECKECGKAFIRSSSLAKHERIHTGEKPYQCHEC 563

  Fly   410 IRRF--------------------CENPTEESYFEEI------RSFMGKVTQQQQQQQQQQQHDQ 448
            .:.|                    | |....::.:.|      |...|....:..:..:..:|..
Human   564 GKTFSYGSSLIQHRKIHTGERPYKC-NECGRAFNQNIHLTQHKRIHTGAKPYECAECGKAFRHCS 627

  Fly   449 QQQQHQSTATSASS-SCSSSRDTPTSSHEEADHAPATSTADTAAPSSSRDQEEEDSQPIMELKRT 512
            ...|||.|.|.... .|:....|.:.|.....| ....|.:.....:..|:....|..:.|.:.|
Human   628 SLAQHQKTHTEEKPYQCNKCEKTFSQSSHLTQH-QRIHTGEKPYKCNECDKAFSRSTHLTEHQNT 691

  Fly   513 LTSKLFPTTTADSAMTTPQTT 533
            .|.:. |....:...|..|:|
Human   692 HTGEK-PYNCNECRKTFSQST 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 29/67 (43%)
zf-C2H2 311..333 CDD:278523 9/21 (43%)
C2H2 Zn finger 313..333 CDD:275368 8/19 (42%)
zf-H2C2_2 325..349 CDD:290200 12/23 (52%)
C2H2 Zn finger 341..362 CDD:275368 8/20 (40%)
zf-H2C2_2 353..377 CDD:290200 10/23 (43%)
zf-C2H2 368..390 CDD:278523 8/21 (38%)
C2H2 Zn finger 370..390 CDD:275368 7/19 (37%)
ZNF184NP_001305820.1 KRAB 28..88 CDD:214630
KRAB 28..67 CDD:279668
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..212 5/20 (25%)
C2H2 Zn finger 224..244 CDD:275368 1/19 (5%)
zf-H2C2_2 236..261 CDD:290200 1/24 (4%)
COG5048 <248..409 CDD:227381 27/176 (15%)
C2H2 Zn finger 252..272 CDD:275368 3/19 (16%)
zf-H2C2_2 264..287 CDD:290200 2/22 (9%)
C2H2 Zn finger 280..300 CDD:275368 7/33 (21%)
zf-H2C2_2 292..317 CDD:290200 5/24 (21%)
C2H2 Zn finger 308..328 CDD:275368 2/19 (11%)
zf-H2C2_2 320..345 CDD:290200 4/24 (17%)
C2H2 Zn finger 336..356 CDD:275368 3/19 (16%)
zf-H2C2_2 348..373 CDD:290200 4/26 (15%)
COG5048 360..736 CDD:227381 86/364 (24%)
C2H2 Zn finger 364..384 CDD:275368 4/19 (21%)
zf-H2C2_2 376..400 CDD:290200 3/23 (13%)
C2H2 Zn finger 392..412 CDD:275368 2/19 (11%)
zf-C2H2 418..440 CDD:278523 7/27 (26%)
C2H2 Zn finger 420..440 CDD:275368 6/25 (24%)
zf-H2C2_2 432..457 CDD:290200 10/24 (42%)
C2H2 Zn finger 448..468 CDD:275368 8/19 (42%)
zf-H2C2_2 460..485 CDD:290200 13/24 (54%)
C2H2 Zn finger 476..496 CDD:275368 8/20 (40%)
zf-H2C2_2 488..513 CDD:290200 11/25 (44%)
C2H2 Zn finger 504..524 CDD:275368 7/19 (37%)
zf-H2C2_2 516..541 CDD:290200 6/24 (25%)
C2H2 Zn finger 532..552 CDD:275368 4/19 (21%)
zf-H2C2_2 544..569 CDD:290200 5/24 (21%)
C2H2 Zn finger 560..580 CDD:275368 2/19 (11%)
zf-H2C2_2 572..597 CDD:290200 2/25 (8%)
C2H2 Zn finger 588..608 CDD:275368 4/20 (20%)
zf-H2C2_2 600..625 CDD:290200 2/24 (8%)
C2H2 Zn finger 616..636 CDD:275368 4/19 (21%)
zf-H2C2_2 628..653 CDD:290200 7/24 (29%)
C2H2 Zn finger 644..664 CDD:275368 4/20 (20%)
zf-H2C2_2 656..681 CDD:290200 3/25 (12%)
C2H2 Zn finger 672..692 CDD:275368 3/19 (16%)
zf-H2C2_2 684..709 CDD:290200 5/25 (20%)
C2H2 Zn finger 700..720 CDD:275368 3/12 (25%)
C2H2 Zn finger 728..748 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.