DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10348 and ZNF18

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001290210.1 Gene:ZNF18 / 7566 HGNCID:12969 Length:549 Species:Homo sapiens


Alignment Length:492 Identity:114/492 - (23%)
Similarity:170/492 - (34%) Gaps:165/492 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PSPKQGCVYPALGLIPTSY----ISHVPYDLASSASVAATSSSSTSPTTTSATTTGRLQHQ---- 69
            ||.:.|.|.|.|.::|...    .|..|.:|.|  .:....|.:.:....:|:...||:.:    
Human   147 PSCQVGEVEPHLEVVPQELGLENSSSGPGELLS--HIVKEESDTEAELALAASQPARLEERLIRD 209

  Fly    70 ----------HSHQQHQTLNHHAKGKRRSSFDQPLDLRL------------AHKRKTDLVDQGPM 112
                      ...:|.:.|:...|       :|..||.|            :|. |:||.:....
Human   210 QDLGASLLPAAPQEQWRQLDSTQK-------EQYWDLMLETYGKMVSGAGISHP-KSDLTNSIEF 266

  Fly   113 EDENSNLIMFASE-------LAVAQQKEKE-LN-NNH-----IAASLADLGFDMSRKMLRAL--- 160
            .:|.:.:.:..:|       :...|:.:|| || .||     :.||....|...|:..||..   
Human   267 GEELAGIYLHVNEKIPRPTCIGDRQENDKENLNLENHRDQELLHASCQASGEVPSQASLRGFFTE 331

  Fly   161 REGGAGGGGGGGGGGGGGGGPPNAPPLTPPQCSIPAVHPTLLEAMTKNLPLQYRNVFAGVLPGKV 225
            .|.|..|.|                                     :|||...:|:         
Human   332 DEPGCFGEG-------------------------------------ENLPEALQNI--------- 350

  Fly   226 NSPAASSSPTGADFPFRHPLKKCELTWPPPTEQLQLELPHPNPKLSPVLPHPQLQDYQTR-RKNK 289
                 ....||                    |||..:......:|...||:|...:..|. .:.|
Human   351 -----QDEGTG--------------------EQLSPQERISEKQLGQHLPNPHSGEMSTMWLEEK 390

  Fly   290 ARTAATGGNATP---NLP------------------QR---NKDRYTCKFCGKVFPRSANLTRHL 330
            ..|:..|....|   .||                  ||   .:..:.|..|.|.|.||::..:|.
Human   391 RETSQKGQPRAPMAQKLPTCRECGKTFYRNSQLIFHQRTHTGETYFQCTICKKAFLRSSDFVKHQ 455

  Fly   331 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKHESDAV 395
            ||||||:|.||.||.:.||..|.| ||...||..|:|:||.|||:.|.|::|.:||.:.|..:..
Human   456 RTHTGEKPCKCDYCGKGFSDFSGL-RHHEKIHTGEKPYKCPICEKSFIQRSNFNRHQRVHTGEKP 519

  Fly   396 SLSALSGVSERMHCIRRFCENPTEESYFEEIRSFMGK 432
            ...:        ||.:.|   ....|..:..||.:||
Human   520 YKCS--------HCGKSF---SWSSSLDKHQRSHLGK 545

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 30/86 (35%)
zf-C2H2 311..333 CDD:278523 8/21 (38%)
C2H2 Zn finger 313..333 CDD:275368 8/19 (42%)
zf-H2C2_2 325..349 CDD:290200 12/23 (52%)
C2H2 Zn finger 341..362 CDD:275368 9/20 (45%)
zf-H2C2_2 353..377 CDD:290200 12/23 (52%)
zf-C2H2 368..390 CDD:278523 10/21 (48%)
C2H2 Zn finger 370..390 CDD:275368 9/19 (47%)