DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and PRDM1

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_011534364.1 Gene:PRDM1 / 639 HGNCID:9346 Length:839 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381
zf-C2H2 311..333 CDD:278523
C2H2 Zn finger 313..333 CDD:275368
zf-H2C2_2 325..349 CDD:290200
C2H2 Zn finger 341..362 CDD:275368
zf-H2C2_2 353..377 CDD:290200
zf-C2H2 368..390 CDD:278523
C2H2 Zn finger 370..390 CDD:275368
PRDM1XP_011534364.1 SET 114..220 CDD:214614
COG5048 <584..702 CDD:227381
zf-C2H2 589..611 CDD:278523
C2H2 Zn finger 591..611 CDD:275368
zf-H2C2_2 603..628 CDD:290200
C2H2 Zn finger 619..639 CDD:275368
zf-H2C2_2 631..656 CDD:290200
C2H2 Zn finger 647..667 CDD:275368
zf-H2C2_2 659..684 CDD:290200
C2H2 Zn finger 675..695 CDD:275368
zf-H2C2_2 687..708 CDD:290200
C2H2 Zn finger 703..721 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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