DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and znf143

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_012816676.1 Gene:znf143 / 595042 XenbaseID:XB-GENE-1012504 Length:632 Species:Xenopus tropicalis


Alignment Length:595 Identity:131/595 - (22%)
Similarity:189/595 - (31%) Gaps:184/595 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SYISHVPY--DLASSASVAATSSSSTSPTTTSATTTGRLQHQHSHQQHQTLNHHAKGKRRSSFDQ 92
            :|:.|||.  ||:.....|......|:                      ...||:.   :.|:||
 Frog    84 AYVQHVPKGDDLSLEDGQAVQLEDGTT----------------------AYIHHSS---KDSYDQ 123

  Fly    93 PLDLRLAHKRKTDLVDQGPMEDENSNLIMFA-----SELAVAQQKEKELNNNHIAASLADLGFDM 152
                        ..|....:||..:..|..|     |:..:|.|.:..:...|...:..|     
 Frog   124 ------------SSVQAVQLEDGTTAYIHHAVQVPQSDTILAIQADGTVAGLHTGEASID----- 171

  Fly   153 SRKMLRALREGGAGGGGGGGGGGGG-------------------GGGPPNAPPLTPP---QCSIP 195
             ...:.||.:..|.....||.|.|.                   |...|..||.|..   :|...
 Frog   172 -PDTISALEQYAAKVSIEGGEGAGSNALINESESEKKMQIVLSHGSRIPAKPPQTNEKAFRCDYE 235

  Fly   196 A------------VHPTLLEAMTKNLPLQ-----YRNVFAGVLPGKVNSPAASSSPT-GADFPFR 242
            .            ||.   .:.|.:.|.|     .|..||..........|.:|.|: |.|.   
 Frog   236 GCGKLYTTAHHLKVHE---RSHTGDRPYQCDHGGCRKAFATAPASPRKDKAKASGPSEGEDH--- 294

  Fly   243 HPLKKCELTWPPPTEQLQLELPHPNPKLSP-----VLPHPQLQDYQTRRKNKARTAATGGNATPN 302
                     .||....:..|:|......:|     |..|..:...|..:|    ||...|..:..
 Frog   295 ---------LPPEETSVPPEVPEEGRPQNPGQRGRVRRHRIVSGVQGIQK----TADGYGLKSHV 346

  Fly   303 LPQRNKDRYTC--KFCGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHN 363
            .....:..|.|  :.|.|.|..|.:|.:|:||||||:|:||.:  |.|||:.|:..:.|:|. |.
 Frog   347 RTHTGEKPYRCSEENCTKSFKTSGDLQKHVRTHTGERPFKCPFEGCGRSFTTSNIRKVHIRT-HT 410

  Fly   364 KERPFKCEI--CERCFGQQTNLDRHLKKHESDAVSLSALSGVSERM------------------- 407
            .|||:.|..  |.|.|...||...|::.|..:...:..:.|..:|.                   
 Frog   411 GERPYYCSEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHSKPY 475

  Fly   408 ---HC------------IRRFCENPTE------ESYF------EEIR-SFMGKVT--------QQ 436
               ||            .:|...|.||      ||:|      |.|: |.:..||        |.
 Frog   476 NCNHCGKTYKQISTLAMHKRTAHNDTEPIEEEQESFFVPQPPDEVIKGSQITYVTGVDGEDGIQT 540

  Fly   437 QQQQQQQQQHDQQQQQHQSTATSASSS--CSSSRDTPTSSHE--EADHAP----ATSTADTAAPS 493
            .|..||.....|....|.:......|:  .|::...|..||.  .::..|    |||.....|..
 Frog   541 TQSGQQLALIAQDGTSHVAIVAQDLSAFHTSATESGPQHSHNLGGSESRPVTLLATSNGRQIAVQ 605

  Fly   494 SSRDQEEEDS 503
            ....|..|::
 Frog   606 IGEQQSLEEA 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 24/66 (36%)
zf-C2H2 311..333 CDD:278523 9/23 (39%)
C2H2 Zn finger 313..333 CDD:275368 8/21 (38%)
zf-H2C2_2 325..349 CDD:290200 14/25 (56%)
C2H2 Zn finger 341..362 CDD:275368 8/22 (36%)
zf-H2C2_2 353..377 CDD:290200 9/25 (36%)
zf-C2H2 368..390 CDD:278523 7/23 (30%)
C2H2 Zn finger 370..390 CDD:275368 7/21 (33%)
znf143XP_012816676.1 C2H2 Zn finger 232..254 CDD:275368 3/24 (13%)
DUF1644 253..384 CDD:369526 37/146 (25%)
COG5048 <331..482 CDD:227381 45/155 (29%)
C2H2 Zn finger 357..379 CDD:275368 8/21 (38%)
C2H2 Zn finger 387..409 CDD:275368 8/22 (36%)
C2H2 Zn finger 417..439 CDD:275368 7/21 (33%)
C2H2 Zn finger 447..469 CDD:275368 2/21 (10%)
C2H2 Zn finger 477..496 CDD:275368 2/18 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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