DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and znf1085

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_021330858.1 Gene:znf1085 / 567150 ZFINID:ZDB-GENE-080218-7 Length:1074 Species:Danio rerio


Alignment Length:152 Identity:50/152 - (32%)
Similarity:80/152 - (52%) Gaps:7/152 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 KDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEI 372
            |..:||..|||.|.:|:.|.||.|.||||:|:.|..|.:||:.||:|.:|:| ||..|:||.|..
Zfish   568 KTPFTCTQCGKSFSQSSYLNRHTRIHTGEKPFTCTLCGKSFNRSSHLNKHMR-IHTGEKPFTCTQ 631

  Fly   373 CERCFGQQTNLDRHLKKHESDAVSLSALSGV------SERMHCIRRFCENPTEESYFEEIRSFMG 431
            |.:.|.|:.||..|::.|..:........|.      |.:.|.|..|.:..:|:...||..:...
Zfish   632 CGKSFSQKQNLTIHMRIHTGEKPYTCTECGKSFPHTGSLKHHMIMAFIKEESEDVKIEETFTVKQ 696

  Fly   432 KVTQQQQQQQQQQQHDQQQQQH 453
            :..|:|....::.:..::::.|
Zfish   697 EDLQEQTDLIEENEGRKEEEHH 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 27/54 (50%)
zf-C2H2 311..333 CDD:278523 11/21 (52%)
C2H2 Zn finger 313..333 CDD:275368 10/19 (53%)
zf-H2C2_2 325..349 CDD:290200 12/23 (52%)
C2H2 Zn finger 341..362 CDD:275368 9/20 (45%)
zf-H2C2_2 353..377 CDD:290200 10/23 (43%)
zf-C2H2 368..390 CDD:278523 8/21 (38%)
C2H2 Zn finger 370..390 CDD:275368 7/19 (37%)
znf1085XP_021330858.1 COG5048 39..444 CDD:227381
C2H2 Zn finger 41..61 CDD:275368
C2H2 Zn finger 69..89 CDD:275368
C2H2 Zn finger 97..117 CDD:275368
C2H2 Zn finger 125..145 CDD:275368
C2H2 Zn finger 153..173 CDD:275368
C2H2 Zn finger 181..201 CDD:275368
C2H2 Zn finger 209..229 CDD:275368
C2H2 Zn finger 237..257 CDD:275368
COG5048 261..676 CDD:227381 42/108 (39%)
C2H2 Zn finger 265..285 CDD:275368
C2H2 Zn finger 293..313 CDD:275368
C2H2 Zn finger 321..341 CDD:275368
C2H2 Zn finger 349..369 CDD:275368
C2H2 Zn finger 377..397 CDD:275368
C2H2 Zn finger 405..425 CDD:275368
C2H2 Zn finger 433..453 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 489..509 CDD:275368
C2H2 Zn finger 517..537 CDD:275368
C2H2 Zn finger 545..565 CDD:275368
C2H2 Zn finger 573..593 CDD:275368 10/19 (53%)
COG5048 597..1013 CDD:227381 34/123 (28%)
C2H2 Zn finger 601..621 CDD:275368 9/20 (45%)
C2H2 Zn finger 629..649 CDD:275368 7/19 (37%)
C2H2 Zn finger 657..674 CDD:275368 2/16 (13%)
C2H2 Zn finger 743..763 CDD:275368
C2H2 Zn finger 771..791 CDD:275368
C2H2 Zn finger 799..819 CDD:275368
C2H2 Zn finger 827..847 CDD:275368
C2H2 Zn finger 855..875 CDD:275368
C2H2 Zn finger 883..903 CDD:275368
C2H2 Zn finger 911..931 CDD:275368
C2H2 Zn finger 939..959 CDD:275368
C2H2 Zn finger 967..987 CDD:275368
C2H2 Zn finger 995..1015 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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