DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and znf536

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_009301683.1 Gene:znf536 / 565481 ZFINID:ZDB-GENE-030616-624 Length:1485 Species:Danio rerio


Alignment Length:394 Identity:86/394 - (21%)
Similarity:131/394 - (33%) Gaps:134/394 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 PPLTPPQCSIPAVHPTLLEAMTKNLPLQYRNVFAGVLPGKVNSPAASSSPT---GADFPFRHPLK 246
            ||..||...:....|  .|..|: |.::..::..||      |...|.:.|   .|....|:|:.
Zfish     8 PPPPPPPARLAGESP--WECNTR-LRMEDSSLCLGV------SSVVSDADTHLSNAVLNGRYPIS 63

  Fly   247 KCELTWPPPTEQLQLELPHPNPKLSPVLPHPQLQDYQTRRKNKART------------------- 292
            :       ...||..:|.|         ..|:||..|...:.||.|                   
Zfish    64 Q-------KLHQLTAQLGH---------AFPELQSRQQIPEEKAATPLDEKTHAALASQPISSQM 112

  Fly   293 --------------AATGGNATPNLPQ--------------------RNKDRYTCKFCGKVFPRS 323
                          |.:|.|...:|.|                    |...:|.|..|||.|..:
Zfish   113 ALLANQLNRDMDVGALSGLNGRVDLQQFLNGQNLGIMSQMNDIEDDARKNRKYPCPLCGKRFRFN 177

  Fly   324 ANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLK 388
            :.|:.|:||||||:|:||.||:...:                             |:.||..||:
Zfish   178 SILSLHMRTHTGEKPFKCPYCDHRAA-----------------------------QKGNLKIHLR 213

  Fly   389 KHESDAVSLSALSGVSERMHCIRRFCENPTEESYF--EEIRSFMGKVTQQQQQQQQQQQHDQQQQ 451
            .|:     |..|.....|:....|......|.:..  :::|:.:.:..|........|.|.||| 
Zfish   214 THK-----LGNLGKGRGRVREENRLLHELEERAILRDKQMRNSLLQPPQPLPPHLGIQTHSQQQ- 272

  Fly   452 QHQSTATSASSSCSSSRDTPTSSHEEADHAPATSTADTAA--PSSSRDQEEEDSQPIMELKRTLT 514
                    ..|:|...  ||||    ..::|...|..:|:  |:|:..|:|:...|....:.|..
Zfish   273 --------PGSACGLL--TPTS----IGNSPEGLTQPSASPKPASNNLQDEQALNPAQGYRCTFC 323

  Fly   515 SKLF 518
            ...|
Zfish   324 KGKF 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 22/82 (27%)
zf-C2H2 311..333 CDD:278523 9/21 (43%)
C2H2 Zn finger 313..333 CDD:275368 8/19 (42%)
zf-H2C2_2 325..349 CDD:290200 13/23 (57%)
C2H2 Zn finger 341..362 CDD:275368 3/20 (15%)
zf-H2C2_2 353..377 CDD:290200 0/23 (0%)
zf-C2H2 368..390 CDD:278523 5/21 (24%)
C2H2 Zn finger 370..390 CDD:275368 5/19 (26%)
znf536XP_009301683.1 COG5048 161..>215 CDD:227381 24/82 (29%)
C2H2 Zn finger 167..187 CDD:275368 8/19 (42%)
zf-H2C2_2 180..204 CDD:290200 13/52 (25%)
C2H2 Zn finger 195..215 CDD:275368 8/48 (17%)
C2H2 Zn finger 320..341 CDD:275368 2/8 (25%)
C2H2 Zn finger 346..367 CDD:275368
C2H2 Zn finger 392..412 CDD:275368
C2H2 Zn finger 420..440 CDD:275368
zf-C2H2_assoc 715..789 CDD:293212
COG5048 812..>891 CDD:227381
C2H2 Zn finger 812..832 CDD:275368
zf-C2H2 812..832 CDD:278523
zf-H2C2_2 824..846 CDD:290200
C2H2 Zn finger 840..860 CDD:275368
C2H2 Zn finger 1410..1431 CDD:275370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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