DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10348 and si:ch211-117k10.3

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_684045.1 Gene:si:ch211-117k10.3 / 556200 ZFINID:ZDB-GENE-141212-273 Length:371 Species:Danio rerio


Alignment Length:262 Identity:64/262 - (24%)
Similarity:99/262 - (37%) Gaps:87/262 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 PPNAPPLTPPQCSIPAVHPTLLEAMTKNLPLQYRNVFAGVLPGKVNSPAASSSP-TGADFPFR-H 243
            ||::|..:..:.|:.|...|     |::                ||:.|:::|. .||.|..: .
Zfish   132 PPSSPGESEEKSSMMATSQT-----TQS----------------VNATASATSVLVGAPFVLQLQ 175

  Fly   244 PLKKCELTWPPPTEQLQLELPHPNPK------------------------LSPVLPHPQLQDYQT 284
            ||            ||...||.|:.:                        |||.:|...|.....
Zfish   176 PL------------QLSHALPQPDNQSGVAGGLRVAHLVLGVQGTQNITLLSPQVPSATLLPIMG 228

  Fly   285 RRKNK-------------ARTAATGGNA-----TPNLPQRNKDR----YTCKF--CGKVFPRSAN 325
            ...|:             .|.....|..     ||. |.|:...    :.|..  |.|::.:|::
Zfish   229 EAVNQDQKYVKIAPLPIAVRAVGIAGAGLVKAITPR-PSRSTTETLRVHKCSHPGCEKMYTKSSH 292

  Fly   326 LTRHLRTHTGEQPYKCKY--CERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLK 388
            |..|.|.||||:||.|.:  |...||.|..|.|| |..|:..:|::|.:|::.|.:..:|.:|.|
Zfish   293 LKAHFRRHTGEKPYLCSWPDCGWRFSRSDELSRH-RRSHSGVKPYECTMCDKKFARSDHLSKHTK 356

  Fly   389 KH 390
            .|
Zfish   357 VH 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 26/70 (37%)
zf-C2H2 311..333 CDD:278523 7/23 (30%)
C2H2 Zn finger 313..333 CDD:275368 7/21 (33%)
zf-H2C2_2 325..349 CDD:290200 11/25 (44%)
C2H2 Zn finger 341..362 CDD:275368 9/22 (41%)
zf-H2C2_2 353..377 CDD:290200 8/23 (35%)
zf-C2H2 368..390 CDD:278523 6/21 (29%)
C2H2 Zn finger 370..390 CDD:275368 6/19 (32%)
si:ch211-117k10.3XP_684045.1 zf-C2H2 276..300 CDD:278523 7/23 (30%)
zf-C2H2_8 278..357 CDD:292531 29/79 (37%)
C2H2 Zn finger 278..300 CDD:275368 7/21 (33%)
zf-H2C2_2 292..319 CDD:290200 12/26 (46%)
C2H2 Zn finger 308..330 CDD:275368 9/22 (41%)
zf-H2C2_2 322..347 CDD:290200 9/25 (36%)
C2H2 Zn finger 338..358 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.