DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and Zkscan6

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001289303.1 Gene:Zkscan6 / 52712 MGIID:1289293 Length:556 Species:Mus musculus


Alignment Length:504 Identity:109/504 - (21%)
Similarity:173/504 - (34%) Gaps:171/504 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LPSPKQGCVY-------PALGLIPTSYISHVPYDLASSASVAATSSSSTSPTTTSATTTGRLQHQ 69
            :|..|:...:       |||.:.|:..::  |.||               |...|::.||.|   
Mouse   139 IPFEKENLTHCPGDKLEPALEVEPSLEVA--PQDL---------------PLQNSSSATGEL--- 183

  Fly    70 HSHQQHQTLNHHAKGKRRSSFDQPLDLRLAHKRKTDLVDQGPMEDENSNLIMFASELAVA----- 129
                    |:|   |.:..|..:| :|.||..:.....::.|:.|:         ||..|     
Mouse   184 --------LSH---GVKEESDMEP-ELALAASQLPARPEERPVRDQ---------ELGTAVLPPL 227

  Fly   130 -QQKEKELNNNHIAASLADLGFDMSRKMLRALREGGAGGGGGGGGGGGGGGGPPNAPPLTPPQCS 193
             :::.:.|::.. .....||..:...||:              .|..|.....|:...|......
Mouse   228 QEEQWRHLDSTQ-KEQYWDLMLETYGKMV--------------SGVAGISNSKPDLTNLAEYGEE 277

  Fly   194 IPAVHPTLLEAMTK-------------NLPLQYR------NVF---AGVLP-------------- 222
            :..:|....|.|.:             ||.|:..      :||   :|..|              
Mouse   278 LVGLHLHGAEKMARLPCKEDRQENDKENLNLENHRDQGCLDVFCQASGEAPPQTALSDFFGESEP 342

  Fly   223 ---GKVNSPAA----SSSPTGAD-FPFRHPLKKCELTWPPPTEQLQLELPHPNPKLSPVLPHPQL 279
               |..:.|.|    ....|||. ||:.....|      .|.:.:|               ...|
Mouse   343 HRFGGDSVPEALENHQGEGTGAHLFPYERGSGK------QPGQHIQ---------------SSSL 386

  Fly   280 QDYQTRRKNKARTAATGGNATPNLPQR-------------------------NKDRYTCKFCGKV 319
            .:.......:.|.|:..|.|...:.|:                         .:..:.|..|.|.
Mouse   387 GELTALWLEEKREASQKGQARSPMAQKLPTCRECGKTFYRNSQLVFHQRTHTGETYFHCHICKKA 451

  Fly   320 FPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLD 384
            |.||::..:|.||||||:|.||.||.:.||..|.| ||...||..|:|:||.:||:.|.|::|.:
Mouse   452 FLRSSDFVKHQRTHTGEKPCKCDYCGKGFSDFSGL-RHHEKIHTGEKPYKCPLCEKSFIQRSNFN 515

  Fly   385 RHLKKHESDAVSLSALSGVSERMHCIRRFCENPTEESYFEEIRSFMGKV 433
            ||.:.|..:.        ..:..||.::|   ....|..:..||.:||:
Mouse   516 RHQRVHTGEK--------PYKCTHCGKQF---SWSSSLDKHQRSHLGKM 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 26/87 (30%)
zf-C2H2 311..333 CDD:278523 8/21 (38%)
C2H2 Zn finger 313..333 CDD:275368 8/19 (42%)
zf-H2C2_2 325..349 CDD:290200 12/23 (52%)
C2H2 Zn finger 341..362 CDD:275368 9/20 (45%)
zf-H2C2_2 353..377 CDD:290200 11/23 (48%)
zf-C2H2 368..390 CDD:278523 9/21 (43%)
C2H2 Zn finger 370..390 CDD:275368 8/19 (42%)
Zkscan6NP_001289303.1 SCAN 37..144 CDD:383046 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..195 11/54 (20%)
KRAB_A-box 229..278 CDD:383038 9/63 (14%)
C2H2 Zn finger 417..437 CDD:275368 0/19 (0%)
COG5048 <428..541 CDD:227381 41/124 (33%)
C2H2 Zn finger 445..465 CDD:275368 8/19 (42%)
C2H2 Zn finger 473..493 CDD:275368 9/20 (45%)
C2H2 Zn finger 501..521 CDD:275368 8/19 (42%)
C2H2 Zn finger 529..549 CDD:275368 5/22 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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