DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and zgc:113135

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001013324.1 Gene:zgc:113135 / 503712 ZFINID:ZDB-GENE-050306-7 Length:323 Species:Danio rerio


Alignment Length:270 Identity:71/270 - (26%)
Similarity:104/270 - (38%) Gaps:47/270 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 PTEQLQL-----ELPHPNPK-------LSPVLPHPQLQDYQTRRKNKARTAAT--------GGNA 299
            |.||..|     |..|.|..       ::.|.|....:....||..|::::..        ..:.
Zfish    24 PQEQTDLMVLKEETHHMNEMEEKQQEIMTDVKPALTKKTSSRRRPRKSKSSCNFSCKQSRKSFSQ 88

  Fly   300 TPNLPQRNKDR-YTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHN 363
            .|||....::: ||||.|.|.|..:.||..|:|.||||:||.|:.|.:||..:.||..| |.||.
Zfish    89 KPNLDVHTREKPYTCKQCEKSFYNTGNLKVHMRIHTGERPYTCQQCGKSFYSTGNLAVH-RRIHT 152

  Fly   364 KERPFKCEICERCFGQQTNLDRHLKKH--ESDAVSLSALSGVSERMHCIRRFCENPTEESY--FE 424
            .||.:.|..|.:...|..||:.|::.|  |...:......|.|::.:.......:..|:.|  .|
Zfish   153 GERLYFCPQCGKSCKQNGNLEAHMRTHTGERSFICTQCGKGFSQKQNLTIHMRIHTGEKPYTCTE 217

  Fly   425 EIRSFMGKVTQQQQQQQQQQQHDQQQQQHQSTATS----ASSSCSSSRDTPTS--SHEEADHAPA 483
            ..:||               .|....:.|..:.|.    |.:.|..|..|..|  :|........
Zfish   218 CGKSF---------------PHAGSLKHHMISHTGQKPFACAHCGKSFTTKASLMNHMNGHTGTT 267

  Fly   484 TSTADTAAPS 493
            ..|.|....|
Zfish   268 VFTCDQCGKS 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 29/63 (46%)
zf-C2H2 311..333 CDD:278523 11/21 (52%)
C2H2 Zn finger 313..333 CDD:275368 9/19 (47%)
zf-H2C2_2 325..349 CDD:290200 13/23 (57%)
C2H2 Zn finger 341..362 CDD:275368 8/20 (40%)
zf-H2C2_2 353..377 CDD:290200 10/23 (43%)
zf-C2H2 368..390 CDD:278523 6/21 (29%)
C2H2 Zn finger 370..390 CDD:275368 6/19 (32%)
zgc:113135NP_001013324.1 C2H2 Zn finger 79..95 CDD:275368 3/15 (20%)
C2H2 Zn finger 103..123 CDD:275368 9/19 (47%)
zf-H2C2_2 115..138 CDD:290200 12/22 (55%)
C2H2 Zn finger 131..151 CDD:275368 8/20 (40%)
COG5048 <159..316 CDD:227381 27/134 (20%)
C2H2 Zn finger 159..179 CDD:275368 6/19 (32%)
zf-H2C2_2 171..196 CDD:290200 6/24 (25%)
C2H2 Zn finger 187..207 CDD:275368 2/19 (11%)
zf-H2C2_2 199..222 CDD:290200 3/22 (14%)
C2H2 Zn finger 215..235 CDD:275368 5/34 (15%)
zf-H2C2_2 227..252 CDD:290200 5/24 (21%)
C2H2 Zn finger 243..263 CDD:275368 5/19 (26%)
C2H2 Zn finger 271..291 CDD:275368 2/7 (29%)
C2H2 Zn finger 298..318 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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