DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and LOC496795

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001011332.2 Gene:LOC496795 / 496795 -ID:- Length:581 Species:Xenopus tropicalis


Alignment Length:82 Identity:37/82 - (45%)
Similarity:53/82 - (64%) Gaps:1/82 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 RYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEICE 374
            :|.||.||:.|.:|:.|.:|...||||:|:.|..|.:.||.||||..|:| :|..|||:.|.:||
 Frog   501 QYECKECGRKFTQSSTLLKHQLIHTGEKPFACSECGKLFSRSSNLIIHLR-MHTGERPYSCTVCE 564

  Fly   375 RCFGQQTNLDRHLKKHE 391
            |.|...::|.:|.|.|:
 Frog   565 RSFAHSSHLVKHQKLHK 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 24/52 (46%)
zf-C2H2 311..333 CDD:278523 9/21 (43%)
C2H2 Zn finger 313..333 CDD:275368 8/19 (42%)
zf-H2C2_2 325..349 CDD:290200 9/23 (39%)
C2H2 Zn finger 341..362 CDD:275368 10/20 (50%)
zf-H2C2_2 353..377 CDD:290200 12/23 (52%)
zf-C2H2 368..390 CDD:278523 8/21 (38%)
C2H2 Zn finger 370..390 CDD:275368 8/19 (42%)
LOC496795NP_001011332.2 KRAB_A-box 36..96 CDD:383038
COG5048 173..576 CDD:227381 34/75 (45%)
C2H2 Zn finger 173..193 CDD:275368
C2H2 Zn finger 201..221 CDD:275368
C2H2 Zn finger 229..249 CDD:275368
C2H2 Zn finger 308..328 CDD:275368
C2H2 Zn finger 336..356 CDD:275368
C2H2 Zn finger 364..384 CDD:275368
C2H2 Zn finger 392..412 CDD:275368
C2H2 Zn finger 420..440 CDD:275368
C2H2 Zn finger 448..468 CDD:275368
C2H2 Zn finger 476..496 CDD:275368
C2H2 Zn finger 504..524 CDD:275368 8/19 (42%)
C2H2 Zn finger 532..552 CDD:275368 10/20 (50%)
C2H2 Zn finger 560..580 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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