DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and Blimp-1

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001261442.1 Gene:Blimp-1 / 38638 FlyBaseID:FBgn0035625 Length:1216 Species:Drosophila melanogaster


Alignment Length:612 Identity:125/612 - (20%)
Similarity:205/612 - (33%) Gaps:212/612 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PALGLIPTSYISHVPYDLASSASVAATSSSSTSPTTTSATTTGRLQHQHSHQQHQTLNHHAKGKR 86
            |:..::.|...|....:.|::|:.|...:::.:|..||.|     :..:|:::.|...:......
  Fly   645 PSSSILETILTSQHRLEAAAAAANACRQANAATPPPTSPT-----EMAYSYKKSQRYGNAVSPDS 704

  Fly    87 RSSFDQPLDLRLAHKRKTDLVDQGPMEDENSNLIMFASELAVAQQKEKEL------NNNHIAASL 145
            .|:                 :.|.|.:..:|.:::...|:..|...:.|.      :::|     
  Fly   705 SSN-----------------LGQNPEQLSSSAVVVGEQEMTRATMIKGECSPPPPSHHHH----- 747

  Fly   146 ADLGFDMSRKMLRALREGGAGGGGGGGGGGGGGGGPPNAPPLT-----PPQCSI----------- 194
             ::.|..||.....    |||..||.....|..|.|......|     ||..|.           
  Fly   748 -NVIFSPSRHAAYL----GAGEAGGHSPSPGYPGYPHYGAAATSTFHSPPHSSHSPFDRQSNASS 807

  Fly   195 ---PAVHPTLLEAMTKNL---------PLQYRNVFAGVLPGKVNSPAASSSPTGADFPFRHPLKK 247
               .|.:..||:..|:.|         |||      .:.|.:: ||.:|.||.|         ..
  Fly   808 GAGSATNLHLLQTSTQMLNHPLMQPLTPLQ------RLSPLRI-SPPSSLSPDG---------NS 856

  Fly   248 CELTWPPPTEQLQLELPHPNPKLSPVLPHPQLQDYQTRRKNKARTAATGGNATPNLPQRNKD--- 309
            |               |.....|||                  .:.|:.|..:...|.:.||   
  Fly   857 C---------------PRSGSPLSP------------------NSLASRGYRSLPYPLKKKDGKM 888

  Fly   310 RYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEICE 374
            .|.|..|.|.|.:.:||..|||||:||:|:||..|.:||:..::||:| ..:|..|:|.:|:||:
  Fly   889 HYECNVCCKTFGQLSNLKVHLRTHSGERPFKCNVCTKSFTQLAHLQKH-HLVHTGEKPHQCDICK 952

  Fly   375 RCFGQQTNLDRHLKKH---------------------------------------ESDAVSLSAL 400
            :.|...:||..||:.|                                       :...:|.|.|
  Fly   953 KRFSSTSNLKTHLRLHSGQKPYACDLCPQKFTQFVHLKLHKRLHTNDRPYVCQGCDKKYISASGL 1017

  Fly   401 -----------SGVSERM--------HCIRRFCENPTEESYFEEIRSFMGKVT------------ 434
                       :.:.|.:        .|:.:....|.....:|::...|....            
  Fly  1018 RTHWKTTSCKPNNLEEELAMAAAATSECLDKDHPEPDSREAYEQLTQHMHPAVHPGLRHLSSGGQ 1082

  Fly   435 --------------QQQQQQQQQQQHDQQ--------QQQHQSTATSASSSCSSSRDTPTSSHEE 477
                          |||..|||||||.||        ..|| |...:.....::|:..|...|.:
  Fly  1083 SPPRLIPLGNHMAPQQQSHQQQQQQHQQQGVPPPHLLMTQH-SVGPAPMLLTTASQLPPPPPHHQ 1146

  Fly   478 ADHAPATSTADTAAPSSSRDQEEEDSQ 504
            .:..........|.|...:.|:::..|
  Fly  1147 QNSPSRLLQHGHAHPLQMQQQQQQQQQ 1173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 26/65 (40%)
zf-C2H2 311..333 CDD:278523 10/21 (48%)
C2H2 Zn finger 313..333 CDD:275368 9/19 (47%)
zf-H2C2_2 325..349 CDD:290200 14/23 (61%)
C2H2 Zn finger 341..362 CDD:275368 7/20 (35%)
zf-H2C2_2 353..377 CDD:290200 9/23 (39%)
zf-C2H2 368..390 CDD:278523 8/21 (38%)
C2H2 Zn finger 370..390 CDD:275368 8/19 (42%)
Blimp-1NP_001261442.1 SET 133..260 CDD:214614
C2H2 Zn finger 892..912 CDD:275368 9/19 (47%)
zf-H2C2_2 904..929 CDD:290200 15/24 (63%)
C2H2 Zn finger 920..940 CDD:275368 7/20 (35%)
zf-H2C2_2 932..957 CDD:290200 10/25 (40%)
C2H2 Zn finger 948..968 CDD:275368 8/19 (42%)
zf-H2C2_2 960..985 CDD:290200 5/24 (21%)
C2H2 Zn finger 976..996 CDD:275368 0/19 (0%)
C2H2 Zn finger 1004..1023 CDD:275368 3/18 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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