DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and Zfp143

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001012169.2 Gene:Zfp143 / 361627 RGDID:1305662 Length:638 Species:Rattus norvegicus


Alignment Length:363 Identity:76/363 - (20%)
Similarity:111/363 - (30%) Gaps:136/363 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 LQDYQTRRKNKARTAATGGNATPNLPQRNKDRYTCKF---------------------------- 315
            ||.:.||             .||...|..:..:.||:                            
  Rat   218 LQGHATR-------------VTPKSQQSGEKAFRCKYDGCGKLYTTAHHLKVHERSHTGDRPYQC 269

  Fly   316 ----CGKVFPRSANLTRHLRTHTGEQPYKCK--YCERSFSISSNLQRHVRNIHNKERPFKCEI-- 372
                |||.|.....|..|.||||||:||:|.  .|.:||..|.:||:|:|. |..||||||.|  
  Rat   270 EHSGCGKAFATGYGLKSHFRTHTGEKPYRCSEDNCTKSFKTSGDLQKHIRT-HTGERPFKCPIEG 333

  Fly   373 ------------------------------CERCFGQQTNLDRHLKKHESDAVSLSALSGVSERM 407
                                          |.|.|...||...|::.|..:...:..:.|..:|.
  Rat   334 CGRSFTTSNIRKVHIRTHTGERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRF 398

  Fly   408 ----------------------HC------------IRRFCENPTE------ESYFEEIRSFMGK 432
                                  ||            .:|...|.||      |::||..   .|:
  Rat   399 TEYSSLYKHHVVHTHSKPYNCNHCGKTYKQISTLAMHKRTAHNDTEPIEEEQEAFFEPP---PGQ 460

  Fly   433 VTQQQQQQQQQQQHDQQQQQHQSTATSASSSCSSSRDTPTSSHEEADHAPATSTADTAAPSSSRD 497
            .....:..|.......:.:...||..:..:....|:.....|.:...|. ..|.||..|..::..
  Rat   461 GDDVLKGSQITYVTGVEGEDIVSTQVATVTQSGLSQQVTLISQDGTQHV-NISQADMQAIGNTIT 524

  Fly   498 QEEEDSQPIMELKRTLTSKLFPTTTADSAMTTPQTTSI 535
            ...:|..||            ...|.|:.:::..|.|:
  Rat   525 MVTQDGTPI------------TVPTHDAVISSAGTHSV 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 28/96 (29%)
zf-C2H2 311..333 CDD:278523 9/53 (17%)
C2H2 Zn finger 313..333 CDD:275368 9/51 (18%)
zf-H2C2_2 325..349 CDD:290200 13/25 (52%)
C2H2 Zn finger 341..362 CDD:275368 9/22 (41%)
zf-H2C2_2 353..377 CDD:290200 14/55 (25%)
zf-C2H2 368..390 CDD:278523 10/53 (19%)
C2H2 Zn finger 370..390 CDD:275368 8/51 (16%)
Zfp143NP_001012169.2 SFP1 <207..292 CDD:227516 17/86 (20%)
C2H2 Zn finger 239..261 CDD:275368 2/21 (10%)
COG5048 <251..424 CDD:227381 42/173 (24%)
C2H2 Zn finger 269..291 CDD:275368 7/21 (33%)
C2H2 Zn finger 299..321 CDD:275368 9/22 (41%)
C2H2 Zn finger 329..351 CDD:275368 2/21 (10%)
C2H2 Zn finger 359..381 CDD:275368 6/21 (29%)
C2H2 Zn finger 389..411 CDD:275368 2/21 (10%)
C2H2 Zn finger 419..438 CDD:275368 2/18 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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