DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and crol

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster


Alignment Length:472 Identity:93/472 - (19%)
Similarity:155/472 - (32%) Gaps:150/472 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 KMLRALREGGAGGGGGGGGGGGGGG-----GPPNAPPLT-------------------------- 188
            ::|....|||..|..|.|.||.|||     .|...|..|                          
  Fly   180 ELLMPKMEGGIHGVDGSGNGGNGGGQNVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHS 244

  Fly   189 ---PPQCSIPAVHPTLLEAMTKNLPLQYR----------NVFAG-------VLPGKVNSPAASS- 232
               |..|.:.....|..:.:|::..:...          ||||.       :.....:.|.|.: 
  Fly   245 ERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTI 309

  Fly   233 ----------------SPTGADFPFRHPLKKCELTWPPPTEQLQL------ELPH---------- 265
                            |.|| :.|||  .:.|..|:......:..      |.||          
  Fly   310 CQKTFARKEHLDNHFRSHTG-ETPFR--CQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFT 371

  Fly   266 -PNPKLSPVLPHPQLQDYQ--------TRRKNKARTAATGGNATP------NLPQRNKDRYT--- 312
             ....::..:.|.....:|        ||:::.|....:..|.||      ......|:.:|   
  Fly   372 RKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHI 436

  Fly   313 ----------CKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERP 367
                      |.||.|.|.|..:|..|:|.||||.|::|.||.::|:...:|..|:|. |..|.|
  Fly   437 LWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQ-HTGETP 500

  Fly   368 FKCEICERCFGQQTNLDRHLKKHESDAVSLSALSGVSERMHCIRRFC--------------ENPT 418
            |||..|.:.|.::.::..|:::|..::        ..:..:|.:.|.              ::|.
  Fly   501 FKCTYCTKAFTRKDHMVNHVRQHTGES--------PHKCTYCTKTFTRKEHLTNHVRQHTGDSPH 557

  Fly   419 EESYFEE-----------IRSFMGKVTQQQQQQQQQQQHDQQQQQHQSTATSASSSCSSSRDTPT 472
            ..||.::           :|...|....:.:..|:.....:....|....:|.:..|.:..:.|.
  Fly   558 RCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPF 622

  Fly   473 SSHEE-ADHAPATSTAD 488
            :..|. .:|.....|.|
  Fly   623 TRKEHLINHMSRCHTGD 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 25/81 (31%)
zf-C2H2 311..333 CDD:278523 10/34 (29%)
C2H2 Zn finger 313..333 CDD:275368 9/19 (47%)
zf-H2C2_2 325..349 CDD:290200 11/23 (48%)
C2H2 Zn finger 341..362 CDD:275368 7/20 (35%)
zf-H2C2_2 353..377 CDD:290200 10/23 (43%)
zf-C2H2 368..390 CDD:278523 6/21 (29%)
C2H2 Zn finger 370..390 CDD:275368 4/19 (21%)
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 0/19 (0%)
C2H2 Zn finger 251..271 CDD:275368 3/19 (16%)
C2H2 Zn finger 279..299 CDD:275368 4/19 (21%)
COG5048 300..723 CDD:227381 70/352 (20%)
C2H2 Zn finger 307..327 CDD:275368 0/19 (0%)
C2H2 Zn finger 335..355 CDD:275368 2/19 (11%)
C2H2 Zn finger 363..383 CDD:275368 0/19 (0%)
C2H2 Zn finger 391..411 CDD:275368 3/19 (16%)
C2H2 Zn finger 419..439 CDD:275368 2/19 (11%)
C2H2 Zn finger 447..467 CDD:275368 9/19 (47%)
C2H2 Zn finger 475..495 CDD:275368 7/20 (35%)
C2H2 Zn finger 503..523 CDD:275368 4/19 (21%)
C2H2 Zn finger 531..551 CDD:275368 2/19 (11%)
C2H2 Zn finger 559..579 CDD:275368 3/19 (16%)
C2H2 Zn finger 587..607 CDD:275368 2/19 (11%)
C2H2 Zn finger 615..636 CDD:275368 3/20 (15%)
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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