DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and Kr-h1

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster


Alignment Length:635 Identity:133/635 - (20%)
Similarity:214/635 - (33%) Gaps:211/635 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SPRKMLPSPKQGCVYPALGLIPTSYISHVPYDLASSASVAATSSSSTS-------PTTTSATTTG 64
            ||.|.:...|.    ||.....|..:    |..|:...:....||...       |.|.:.|:.|
  Fly    35 SPAKAVAVKKS----PAKDSATTKMV----YYSANQLLIKTEQSSQAQFCLQVPPPLTATTTSVG 91

  Fly    65 RLQHQHSHQQHQTLNHHAKGKRRSSFDQPLDLRLAHKRKTDLVDQGPMEDENSNLIMFASELAVA 129
                         |.....|.::..|:.   |:...:|:..|..|...:.|....:.:  :||:.
  Fly    92 -------------LGVPPSGGQQEHFEL---LQTPQQRQMQLQLQDQHQQEQQQFVSY--QLAIQ 138

  Fly   130 QQKEKELNNNH--------IAASLADL-------GFDMSRKMLRALREGGAGGGGGGGGGGGGGG 179
            |.::::....|        .||..|..       ||..|..::..:|:..|              
  Fly   139 QHQKQQQQQQHESITNAAPTAAPSAQRIKTEPVGGFPASAAVVSQVRKPSA-------------- 189

  Fly   180 GPPNAPPLTPPQCSI----PAVHPTLLEAMTKNLPLQYRNVFAGVLPGKVNSPAASSSPTGADFP 240
               :.|.....||.:    .:.|.:..::.:||..|.........:...|::.|...:..|    
  Fly   190 ---SKPQFKCDQCGMTFGSKSAHTSHTKSHSKNQDLSLNGASGAGVAAPVSTAAIELNDAG---- 247

  Fly   241 FRHPLKKCELTWPPPTEQLQLELPHPNPKLSPVLPHPQLQDYQTRRKNKARTAATGGNATPNLPQ 305
                                  ||...|| ||.:            |..|..||           
  Fly   248 ----------------------LPVGIPK-SPTI------------KPLANVAA----------- 266

  Fly   306 RNKDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKC 370
             ..|.|.|..|.|.|...|.|.||.||||||:|::|::|.:.||:..|||.| |.||.||||:||
  Fly   267 -GADPYQCNVCQKTFAVPARLIRHYRTHTGERPFECEFCHKLFSVKENLQVH-RRIHTKERPYKC 329

  Fly   371 EICERCFGQQTNLDRHLKKHESD------------------AVSLSALSG--------------- 402
            ::|.|.|.....|.||::.|..:                  .:.:...:|               
  Fly   330 DVCGRAFEHSGKLHRHMRIHTGERPHKCSVCEKTFIQSGQLVIHMRTHTGEKPYKCPEPGCGKGF 394

  Fly   403 -------VSERMH----------CIRRFCENPT----------EESYFEEI--RSFMGKVTQQQQ 438
                   |..|.|          |.|.|..|..          .:.|...|  .:|..|...:..
  Fly   395 TCSKQLKVHSRTHTGEKPYHCDICFRDFGYNHVLKLHRVQHYGSKCYKCTICDETFKNKKEMEAH 459

  Fly   439 QQQQQQQHDQQQQQHQSTATSASSSCSSSRDTP-----TSSHEEADHAPATSTADTAAPSSSRDQ 498
            .:....:....:.:..:.:.:||:|..||..:|     :|:.|.::|:|.:|...|..|..:|  
  Fly   460 IKGHANEVPDDEAEAAAASAAASTSAGSSAGSPSLQGVSSNSESSNHSPPSSPPATKKPRQAR-- 522

  Fly   499 EEEDSQPIMELKRTLTSKL-FPTTT-------------ADSAMTTPQTTS 534
                 ||  .:.:|:.:.| .||::             :.|:|.:|..||
  Fly   523 -----QP--RVSKTVAATLSIPTSSPLSPSSLSSTYSPSASSMASPPPTS 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 27/62 (44%)
zf-C2H2 311..333 CDD:278523 10/21 (48%)
C2H2 Zn finger 313..333 CDD:275368 9/19 (47%)
zf-H2C2_2 325..349 CDD:290200 12/23 (52%)
C2H2 Zn finger 341..362 CDD:275368 9/20 (45%)
zf-H2C2_2 353..377 CDD:290200 15/23 (65%)
zf-C2H2 368..390 CDD:278523 8/21 (38%)
C2H2 Zn finger 370..390 CDD:275368 7/19 (37%)
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368 3/19 (16%)
COG5048 <270..420 CDD:227381 45/150 (30%)
zf-C2H2 271..293 CDD:278523 10/21 (48%)
C2H2 Zn finger 273..293 CDD:275368 9/19 (47%)
zf-H2C2_2 286..309 CDD:290200 12/22 (55%)
C2H2 Zn finger 301..321 CDD:275368 9/20 (45%)
zf-H2C2_2 313..338 CDD:290200 16/25 (64%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
zf-H2C2_2 344..366 CDD:290200 3/21 (14%)
C2H2 Zn finger 357..377 CDD:275368 0/19 (0%)
zf-H2C2_2 370..396 CDD:290200 1/25 (4%)
C2H2 Zn finger 385..407 CDD:275368 2/21 (10%)
zf-H2C2_2 400..424 CDD:290200 6/23 (26%)
C2H2 Zn finger 415..435 CDD:275368 4/19 (21%)
zf-C2H2 441..463 CDD:278523 4/21 (19%)
C2H2 Zn finger 443..463 CDD:275368 3/19 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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