DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10348 and erm

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001259891.2 Gene:erm / 326152 FlyBaseID:FBgn0031375 Length:698 Species:Drosophila melanogaster


Alignment Length:649 Identity:143/649 - (22%)
Similarity:227/649 - (34%) Gaps:188/649 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EKDHSPRKMLPSPKQGCVYPALGLIPTSYISHVPYDLASSASVAATSSSSTSPTTTSATTTGRLQ 67
            |.||.| ..:|.|:     ||    |.|:.:: ..|......:.|.|..|.||....:.      
  Fly    65 EPDHRP-SQVPPPQ-----PA----PVSFATN-DDDEDEDPEIDADSERSCSPIEVISL------ 112

  Fly    68 HQHSHQQHQTLNHHAKGKR---------RSSFDQPLDL----RLAHKRKTDLVDQGPMEDENSNL 119
                .|...|:|:.:..|:         .||...|...    :....|..:|:.|.|:.....|.
  Fly   113 ----DQSPSTVNYDSAFKKYVPGPCSGATSSVASPPSTAAVQQFVSSRHQELLSQYPLLYYAPNQ 173

  Fly   120 IMFASE----LAVAQQKEKELNNNHIAASLADLGFDM--SRKMLRALREGGAGGGGGGGGGGGGG 178
            :|.|:.    .|:..|::...:..|:::..|.|...:  |:.:.|.|                  
  Fly   174 LMCAAAAAQYAALTAQQQSLASAAHLSSFTASLNASLHHSQSLRRNL------------------ 220

  Fly   179 GGPPNAPPLTPPQCSIPAVHPTLLEAMTKNLPLQYRNVFAGVLPGKVNSPAASSSPTGADFP-FR 242
            |.|..|...........|| |.|...:.|: |:..|              .|.||...|:.. .|
  Fly   221 GHPLAAAAAVAAVAQSQAV-PNLQHTLEKS-PVAQR--------------TAQSSGLQANLKRKR 269

  Fly   243 HPLKKCELTWPPP----TEQLQLELPHPNPKLSPVLPHPQLQDYQTRRKNKARTAATGG------ 297
            .|..:.|:| |||    |.........|:|:.|       ::|       .:..:|:||      
  Fly   270 SPQDQGEVT-PPPASTATSATGARSRSPSPQGS-------IED-------SSPGSASGGKPKTFS 319

  Fly   298 ------------NATPNLPQRNKDR-YTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFS 349
                        |.|.::|.....| :.||.|||.|.:::.|.||...||.|:|:||:.|.::|:
  Fly   320 CLECGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTSEKPHKCQTCGKAFN 384

  Fly   350 ISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKHESDAV--------SLSALSGVSER 406
            .||.|..|.| ||...:||.||.|.:.|.|:.|...|...|..:..        :...:..::..
  Fly   385 RSSTLNTHSR-IHAGYKPFVCEYCGKGFHQKGNYKNHKLTHSGEKAYKCNICNKAFHQVYNLTFH 448

  Fly   407 MH------------CIRRFCENPTEESYFEEIRSFMGKV-------TQQQQQQQQQQQ---HDQQ 449
            ||            |.:.||.|...:.:..::....|.:       |..::::..:::   ....
  Fly   449 MHTHNDKKPYTCRVCAKGFCRNFDLKKHMRKLHEIGGDLDDLDMPPTYDRRREYTRREPLASGYG 513

  Fly   450 QQQHQSTATSASSSCS----------SSRDT--------------PTSSHEEADHAPATSTADTA 490
            |...|.|..|:|.|.|          ||.:|              |...|.:...||.......:
  Fly   514 QASGQLTPDSSSGSMSPPINVTTPPLSSGETSNPAWPRSAVSQYPPGGFHHQLGVAPPHDYPSGS 578

  Fly   491 A-----PSSSRDQEEEDSQPIMELKRTLTSKLF--------------PTTTADSAMTTPQTTSI 535
            |     |.....|.::..|....|..|..:|:|              .|:|..|.:|| .||:|
  Fly   579 AFLQLQPQQPHPQSQQHHQQQQRLSETFIAKVFXQRYYAESLNSSTGSTSTTSSTVTT-TTTAI 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 26/63 (41%)
zf-C2H2 311..333 CDD:278523 9/21 (43%)
C2H2 Zn finger 313..333 CDD:275368 9/19 (47%)
zf-H2C2_2 325..349 CDD:290200 10/23 (43%)
C2H2 Zn finger 341..362 CDD:275368 8/20 (40%)
zf-H2C2_2 353..377 CDD:290200 10/23 (43%)
zf-C2H2 368..390 CDD:278523 8/21 (38%)
C2H2 Zn finger 370..390 CDD:275368 7/19 (37%)
ermNP_001259891.2 COG5048 <295..461 CDD:227381 47/180 (26%)
C2H2 Zn finger 320..340 CDD:275368 3/19 (16%)
zf-H2C2_2 332..357 CDD:290200 10/24 (42%)
zf-C2H2 346..368 CDD:278523 9/21 (43%)
C2H2 Zn finger 348..368 CDD:275368 9/19 (47%)
zf-H2C2_2 363..385 CDD:290200 10/21 (48%)
C2H2 Zn finger 376..396 CDD:275368 8/20 (40%)
zf-H2C2_2 389..413 CDD:290200 11/24 (46%)
C2H2 Zn finger 404..424 CDD:275368 7/19 (37%)
zf-H2C2_2 416..441 CDD:290200 3/24 (13%)
C2H2 Zn finger 432..452 CDD:275368 2/19 (11%)
C2H2 Zn finger 460..478 CDD:275368 4/17 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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