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Protein Alignment CG10348 and Klf1

DIOPT Version :9

Sequence 1:	NP_001286059.1	Gene:	CG10348 / 35132	FlyBaseID:	FBgn0032707	Length:	540	Species:	Drosophila melanogaster
Sequence 2:	XP_006255316.1	Gene:	Klf1 / 304666	RGDID:	1309398	Length:	381	Species:	Rattus norvegicus

Alignment Length:	307	Identity:	81/307 - (26%)
Similarity:	109/307 - (35%)	Gaps:	124/307 - (40%)

- Green bases have known domain annotations that are detailed below.

  Fly   180 GPPNAPPLTPPQCSI-PAVHPTLLEAMTKNLPLQYRNVFAGVLPGKVNSPAASSSPTGADFPFRH 243
            ||  .||.||..|:: |:..|....|..::|     :.:||. ||.|..|..|....|    :.|
  Rat   102 GP--EPPSTPRTCALAPSGGPVAQFAPPESL-----SAYAGG-PGLVTGPLGSEEHAG----WAH 154

  Fly   244 PLKKCELTWPPPTEQLQLELPHPNPKLSPVL---------------------------------- 274
            |..:      |||         |.|.::|||
  Rat   155 PTPR------PPT---------PEPFVAPVLAPGLAPKAQPAFSESRAVSAGGFFPRAGLAVPAA 204

  Fly   275 ---------------PHPQLQ-DYQTRRKNKA-------------------------RTAATG-- 296
                           |.||.| .:|..|...|                         .||..|
  Rat   205 PSAPYGLLSGYPALYPAPQYQGHFQLFRGLAAPSAGPTAPPSFLNCLGPGAVGTELGATAIAGDA 269

  Fly   297 ----GNATP-----NLPQRNKDRYTC--KFCGKVFPRSANLTRHLRTHT-----GEQPYKCKY-- 343
                |.|.|     .|.|:.:..:||  :.|||.:.:|::|..||||||     ||:||.|.:
  Rat   270 GLSPGAAPPKRSRRTLAQKRQAAHTCGHEGCGKSYTKSSHLKAHLRTHTAPCPSGEKPYACSWDG 334

  Fly   344 CERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKH 390
            |...|:.|..|.||.|. |...|||.|.:|.|.|.:..:|..|:|:|
  Rat   335 CNWRFARSDELTRHYRK-HTGHRPFCCGLCPRAFSRSDHLALHMKRH 380

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.