DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10348 and GLI4

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_612474.1 Gene:GLI4 / 2738 HGNCID:4320 Length:376 Species:Homo sapiens


Alignment Length:454 Identity:109/454 - (24%)
Similarity:157/454 - (34%) Gaps:146/454 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SSSSTSPTTTSATTTGRLQHQHSHQQHQTLNHHAKGKRRSS---FDQPLDLRLAHKRKTDL---- 106
            |.|..||.:.|:..|...|| |..|.|  |:.|..|...||   ..||.||.|....:.::    
Human    10 SPSVPSPVSLSSPGTPGTQH-HEPQLH--LHGHQHGSPGSSPKVLSQPSDLDLQDVEEVEIGRDT 71

  Fly   107 --VDQGPMEDENSNLIMFASELAVAQQKEKELNNNHIAASLADLGFDMSRKMLRAL--REGGAGG 167
              .|..|..::            ..:....:..:.....:|        |.:||:|  |...:.|
Human    72 FWPDSEPKPEQ------------APRSPGSQAPDEGAGGAL--------RSLLRSLPRRARCSAG 116

  Fly   168 GGGGGGGGGGGGGPPNAPPLTPPQCSIPAVHPTLLEAMTKNLPLQYRNVFAGVLPGKVNSPAASS 232
            .|.........|.||.|.|...|:   .|...||::                         .|::
Human   117 FGPESSAERPAGQPPGAVPCAQPR---GAWRVTLVQ-------------------------QAAA 153

  Fly   233 SPTGADFPFRHPLKKCELTWPPPTEQLQLELPHPNPKLSPVLPHPQLQDYQTRRKNKARTA---- 293
            .|.||      |.:..||.                            .::...|:..||.|    
Human   154 GPEGA------PERAAELG----------------------------VNFGRSRQGSARGAKPHR 184

  Fly   294 --ATGGNATPNLPQRNKDR-------YTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFS 349
              |.|.:...|.......|       |.|..|||.|...:...:|.|.||||:||:|..|.|:||
Human   185 CEACGKSFKYNSLLLKHQRIHTGEKPYACHECGKRFRGWSGFIQHHRIHTGEKPYECGQCGRAFS 249

  Fly   350 ISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKHESD----------AVSLSALSGVS 404
            .||:..:|:| |||.|:|:||..|.:.|.|.:||.||.:.|..:          |...|::....
Human   250 HSSHFTQHLR-IHNGEKPYKCGECGQAFSQSSNLVRHQRLHTGEKPYACSQCGKAFIWSSVLIEH 313

  Fly   405 ERMHCIRRFCENPTEES-----------YFEEIRSFMGK-----------VTQQQQQQQQQQQH 446
            :|:|.    .|.|.|.|           :|..:|:..|:           ..|..|..|.|:.|
Human   314 QRIHT----GEKPYECSDCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAFGQSSQLIQHQRVH 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 26/69 (38%)
zf-C2H2 311..333 CDD:278523 8/21 (38%)
C2H2 Zn finger 313..333 CDD:275368 7/19 (37%)
zf-H2C2_2 325..349 CDD:290200 11/23 (48%)
C2H2 Zn finger 341..362 CDD:275368 9/20 (45%)
zf-H2C2_2 353..377 CDD:290200 10/23 (43%)
zf-C2H2 368..390 CDD:278523 9/21 (43%)
C2H2 Zn finger 370..390 CDD:275368 8/19 (42%)
GLI4NP_612474.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..97 23/101 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..135 6/21 (29%)
COG5048 <181..343 CDD:227381 51/166 (31%)
zf-C2H2 183..205 CDD:278523 4/21 (19%)
C2H2 Zn finger 185..205 CDD:275368 4/19 (21%)
zf-H2C2_2 198..220 CDD:290200 6/21 (29%)
C2H2 Zn finger 213..233 CDD:275368 7/19 (37%)
zf-H2C2_2 228..250 CDD:290200 12/21 (57%)
C2H2 Zn finger 241..261 CDD:275368 9/20 (45%)
zf-H2C2_2 253..278 CDD:290200 11/25 (44%)
C2H2 Zn finger 269..289 CDD:275368 8/19 (42%)
zf-H2C2_2 281..304 CDD:290200 5/22 (23%)
C2H2 Zn finger 297..317 CDD:275368 3/19 (16%)
zf-H2C2_2 310..332 CDD:290200 6/25 (24%)
COG5048 321..>373 CDD:227381 10/51 (20%)
C2H2 Zn finger 325..345 CDD:275368 3/19 (16%)
zf-H2C2_2 337..360 CDD:290200 3/22 (14%)
C2H2 Zn finger 353..373 CDD:275368 4/19 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.