DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10348 and Zfp143

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_006507593.2 Gene:Zfp143 / 20841 MGIID:1277969 Length:653 Species:Mus musculus


Alignment Length:376 Identity:77/376 - (20%)
Similarity:109/376 - (28%) Gaps:162/376 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 LQDYQTRRKNKARTAATGGNATPNLPQRNKDRYTCKF---------------------------- 315
            ||.:.||             .||...|..:..:.||:                            
Mouse   233 LQGHATR-------------VTPKSQQSGEKAFRCKYDGCGKLYTTAHHLKVHERSHTGDRPYQC 284

  Fly   316 ----CGKVFPRSANLTRHLRTHTGEQPYKCK--YCERSFSISSNLQRHVRNIHNKERPFKCEI-- 372
                |||.|.....|..|.||||||:||:|.  .|.:||..|.:||:|:|. |..||||||.|  
Mouse   285 EHSGCGKAFATGYGLKSHFRTHTGEKPYRCSEDNCTKSFKTSGDLQKHIRT-HTGERPFKCPIEG 348

  Fly   373 ------------------------------CERCFGQQTNLDRHLKKHESDAVSLSALSGVSERM 407
                                          |.|.|...||...|::.|..:...:..:.|..:|.
Mouse   349 CGRSFTTSNIRKVHIRTHTGERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRF 413

  Fly   408 ----------------------HC------------IRRFCENPTE------ESYFEEIRSFMGK 432
                                  ||            .:|...|.||      |::||        
Mouse   414 TEYSSLYKHHVVHTHSKPYNCNHCGKTYKQISTLAMHKRTAHNDTEPIEEEQEAFFE-------- 470

  Fly   433 VTQQQQQQQQQQQHDQQQQQHQ-------------STATSASSSCSSSRDTPTSSHEEADHAPAT 484
                    ....|.|...:..|             ||..:..:....|:.....|.:...|. ..
Mouse   471 --------PPPGQGDDVLKGSQITYVTGVDGEDIVSTQVATVTQSGLSQQVTLISQDGTQHV-NI 526

  Fly   485 STADTAAPSSSRDQEEEDSQPIMELKRTLTSKLFPTTTADSAMTTPQTTSI 535
            |.||..|..::.....:|..||            ...|.|:.:::..|.|:
Mouse   527 SQADMQAIGNTITMVTQDGTPI------------TVPTHDAVISSAGTHSV 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 28/96 (29%)
zf-C2H2 311..333 CDD:278523 9/53 (17%)
C2H2 Zn finger 313..333 CDD:275368 9/51 (18%)
zf-H2C2_2 325..349 CDD:290200 13/25 (52%)
C2H2 Zn finger 341..362 CDD:275368 9/22 (41%)
zf-H2C2_2 353..377 CDD:290200 14/55 (25%)
zf-C2H2 368..390 CDD:278523 10/53 (19%)
C2H2 Zn finger 370..390 CDD:275368 8/51 (16%)
Zfp143XP_006507593.2 SFP1 <222..307 CDD:227516 17/86 (20%)
C2H2 Zn finger 254..276 CDD:275368 2/21 (10%)
COG5048 <266..439 CDD:227381 42/173 (24%)
C2H2 Zn finger 284..306 CDD:275368 7/21 (33%)
C2H2 Zn finger 314..336 CDD:275368 9/22 (41%)
C2H2 Zn finger 344..366 CDD:275368 2/21 (10%)
C2H2 Zn finger 374..396 CDD:275368 6/21 (29%)
C2H2 Zn finger 404..426 CDD:275368 2/21 (10%)
C2H2 Zn finger 434..453 CDD:275368 2/18 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.