DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and sptf-3

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_493353.3 Gene:sptf-3 / 189783 WormBaseID:WBGene00012735 Length:412 Species:Caenorhabditis elegans


Alignment Length:447 Identity:85/447 - (19%)
Similarity:150/447 - (33%) Gaps:128/447 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 HSPRKMLPSPKQGCVY---PALGLIPTSYISHVPYDLASSASVAAT--------SSSSTSPTTTS 59
            |..|...|...|  ||   |:........:..:|..:|.......|        ......|::::
 Worm    28 HHQRTTTPDGSQ--VYLLQPSQSHPQQRQVQFIPIQVAQGEKKPQTVMMNQMMGQQQQQQPSSSN 90

  Fly    60 ATTTGRLQHQHS--HQQHQTLNHHAKGKRRSSFDQPLDLRLAHKRKTDLVDQGPMEDENSNLIMF 122
            ..:..::|.|..  ||..|...|..:.:.::...|.|.:     ...|.|..|.:.:.|.|    
 Worm    91 QQSQQQVQQQQQQVHQVQQVQQHQMQQQNQTVQQQHLMM-----ETIDQVGSGIIGNSNGN---- 146

  Fly   123 ASELAVAQQKEKELNNNHIAASLADLGFDMSRKMLRALRE-----------GGAGGGGGGGGGG- 175
             ::....||::::...:.|  .:|..|....::|.:..::           .||....||.... 
 Worm   147 -NQQQQQQQQQQQQRRDPI--PIAPAGMVSGQRMQQQQQQPQQQQQHNNNNTGASTSNGGVNAAP 208

  Fly   176 -----GG------------------------GGGPPNAPPLTPPQCSIPAVHPTLLEAMTKNLPL 211
                 ||                        ..|||.|.|..|.:......|..::..|.::..:
 Worm   209 VMPVMGGQQRITLGNLHFQQDPNDPQKWIITNEGPPVAGPSAPARKPNQIQHRQMIPQMNEDGMM 273

  Fly   212 QYRNVFAGVLPGKVNSPAASSSPTGADFPFRHPLKKCELTWPPPTEQLQLELPHPNPKLSPVLPH 276
            ...|.:     |.:|......:|           |:|..|.|                       
 Worm   274 NMGNDY-----GDINGQGLGEAP-----------KRCACTCP----------------------- 299

  Fly   277 PQLQDYQTRRKNKARTAATGGNATPNLPQRNKDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYKC 341
            ..||....:...|:|.                  :.|..|.|.:.::::|..|||.|.|.:|:.|
 Worm   300 NCLQQNNRQGDGKSRI------------------HICHLCNKTYGKTSHLRAHLRGHAGNKPFAC 346

  Fly   342 --KYCERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKHESDAVS 396
              ::|.:.|:.|..|||| |..|..|:.|.|..|.:.|.:..:|.:|.:.|:|:.::
 Worm   347 DWQHCNKKFTRSDELQRH-RRTHTGEKRFACNHCGKKFMRSDHLTKHERTHQSNRIN 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 19/64 (30%)
zf-C2H2 311..333 CDD:278523 7/21 (33%)
C2H2 Zn finger 313..333 CDD:275368 7/19 (37%)
zf-H2C2_2 325..349 CDD:290200 9/25 (36%)
C2H2 Zn finger 341..362 CDD:275368 9/22 (41%)
zf-H2C2_2 353..377 CDD:290200 10/23 (43%)
zf-C2H2 368..390 CDD:278523 6/21 (29%)
C2H2 Zn finger 370..390 CDD:275368 5/19 (26%)
sptf-3NP_493353.3 COG5048 <311..406 CDD:227381 31/111 (28%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
zf-C2H2 344..368 CDD:278523 9/24 (38%)
C2H2 Zn finger 346..368 CDD:275368 9/22 (41%)
zf-H2C2_2 360..383 CDD:290200 10/23 (43%)
zf-C2H2 374..396 CDD:278523 6/21 (29%)
C2H2 Zn finger 376..396 CDD:275368 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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