DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10348 and Klf9

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_476559.2 Gene:Klf9 / 117560 RGDID:70934 Length:244 Species:Rattus norvegicus


Alignment Length:236 Identity:63/236 - (26%)
Similarity:106/236 - (44%) Gaps:62/236 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 GGPPNAPPLTPPQ-----------------CSIPAVHPTLLEAMTKNLPLQYRNVFAGVLPG--- 223
            ||.|:|..|..|:                 |::..:..:||: :.|..|:|..:|.:..|..   
  Rat    28 GGAPDAERLRLPEREVTKEHGDPGDTWKDYCTLVTIAKSLLD-LNKYRPIQTPSVCSDSLESPDE 91

  Fly   224 KVNSPAASSSPTGADFPFRHPLKKCELTWPPPTEQLQLELPHPNPKLSPVLPHPQLQDYQTRRKN 288
            .:.|.:..::.:|:. |...|            |:.|.....|:| ||  |.|            
  Rat    92 DIGSDSDVTTESGSS-PSHSP------------EERQDSGSAPSP-LS--LLH------------ 128

  Fly   289 KARTAATGGNATPNLPQRNKDRYTCKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY--CERSFS 349
             :..|:.|.:|       ::.|:.|.:  ||||:.:|::|..|.|.||||:|:.|.:  |.:.||
  Rat   129 -SGVASKGKHA-------SEKRHKCPYSGCGKVYGKSSHLKAHYRVHTGERPFPCTWPDCLKKFS 185

  Fly   350 ISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKH 390
            .|..|.||.|. |..|:.|:|.:||:.|.:..:|.:|.::|
  Rat   186 RSDELTRHYRT-HTGEKQFRCPLCEKRFMRSDHLTKHARRH 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 24/66 (36%)
zf-C2H2 311..333 CDD:278523 9/23 (39%)
C2H2 Zn finger 313..333 CDD:275368 9/21 (43%)
zf-H2C2_2 325..349 CDD:290200 10/25 (40%)
C2H2 Zn finger 341..362 CDD:275368 9/22 (41%)
zf-H2C2_2 353..377 CDD:290200 10/23 (43%)
zf-C2H2 368..390 CDD:278523 7/21 (33%)
C2H2 Zn finger 370..390 CDD:275368 6/19 (32%)
Klf9NP_476559.2 KLF9_N 3..144 CDD:409239 30/152 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..51 6/22 (27%)
COG5048 <78..234 CDD:227381 51/185 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..143 17/99 (17%)
C2H2 Zn finger 145..167 CDD:275368 9/21 (43%)
C2H2 Zn finger 175..197 CDD:275368 9/22 (41%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.