DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and Klf4

DIOPT Version :10

Sequence 1:NP_609904.2 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_446165.1 Gene:Klf4 / 114505 RGDID:621445 Length:482 Species:Rattus norvegicus


Alignment Length:503 Identity:119/503 - (23%)
Similarity:168/503 - (33%) Gaps:173/503 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PSPKQGCVYPALGLIPTS----YISHV---------PYDLASSASVAATSSSSTSPTTTSATTTG 64
            |:.::..:.||..  ||:    .:||:         |||||  |:||....|..:....|:    
  Rat    27 PAGREKTLRPAGA--PTNRWREELSHMKRLPPLPGRPYDLA--ATVATDLESGGAGAACSS---- 83

  Fly    65 RLQHQHSHQQHQTLNHHAKGKRRS-SFDQPLDLRLAHKRKTDLVDQGPMEDENSNLIMFASELAV 128
                          |:.|..:|.: .|:..|||        |.:....:..:.|......:..:.
  Rat    84 --------------NNPALPRRETEEFNDLLDL--------DFILSNSLSHQESVAATVTTSASA 126

  Fly   129 AQQKEKELNNNHIAASLADLGFDMSRKMLRALREGGAGGGGGGGGGGGGGGGPPNAPPLTPP--Q 191
            :.......:....|.|.....:        .:|.||..|...|..|||......:|||.|.|  .
  Rat   127 SSSSSPASSGPASAPSTCSFSY--------PIRAGGDPGVAAGNTGGGLLYSRESAPPPTAPFNL 183

  Fly   192 CSIPAVHPT---LLEAMTKNL-----PLQYRNVFAGVLPGK-------------VNSPAASS--- 232
            ..|..|.|:   :.|.:...|     |.|......|.|.||             ..||:..|   
  Rat   184 ADINDVSPSGGFVAELLRPELDPVYIPPQQPQPPGGGLMGKFVLKASLSTPGSEYTSPSVISVSK 248

  Fly   233 -SPTGA----------------------------------------------------DFPFRHP 244
             ||.|:                                                    |||....
  Rat   249 GSPDGSHPVVVAPYSGGPPRMCPKIKQEAVPSCTVSRSLEAHLSAGPQLSNGHRPNTHDFPLGRQ 313

  Fly   245 LKKCELTWPPPTEQLQ-------LEL-----PHPNPKLSPVLPHPQLQD------YQTRRKNKAR 291
            |.........|.|.|.       |.|     |||.|...|.|| .|:|.      ||        
  Rat   314 LPTRTTPTLSPEELLNSRDCHPGLPLPPGFHPHPGPSYPPFLP-DQMQSQVPSLHYQ-------- 369

  Fly   292 TAATGGNATPNLPQRNKDR----------YTCKF--CGKVFPRSANLTRHLRTHTGEQPYKCKY- 343
            .....|:..|..|:..:.|          :||.:  |||.:.:|::|..||||||||:||.|.: 
  Rat   370 ELMPPGSCLPEEPKPKRGRRSWPRKRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWD 434

  Fly   344 -CERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKH 390
             |...|:.|..|.||.|. |...|||:|:.|:|.|.:..:|..|:|:|
  Rat   435 GCGWKFARSDELTRHYRK-HTGHRPFQCQKCDRAFSRSDHLALHMKRH 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_609904.2 zf-C2H2 311..333 CDD:395048 10/23 (43%)
C2H2 Zn finger 313..333 CDD:275368 9/21 (43%)
zf-H2C2_2 325..349 CDD:463886 13/25 (52%)
C2H2 Zn finger 341..362 CDD:275368 8/22 (36%)
zf-C2H2 368..390 CDD:395048 8/21 (38%)
C2H2 Zn finger 370..390 CDD:275368 7/19 (37%)
Klf4NP_446165.1 KLF4_N 7..399 CDD:409228 82/418 (20%)
COG5048 <394..477 CDD:227381 34/83 (41%)
C2H2 Zn finger 401..423 CDD:275368 9/21 (43%)
C2H2 Zn finger 431..453 CDD:275368 8/22 (36%)
zf-H2C2_2 445..470 CDD:463886 12/25 (48%)
C2H2 Zn finger 461..481 CDD:275368 7/19 (37%)

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