DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and LOC110437813

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_021331303.1 Gene:LOC110437813 / 110437813 -ID:- Length:399 Species:Danio rerio


Alignment Length:222 Identity:64/222 - (28%)
Similarity:89/222 - (40%) Gaps:60/222 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 YTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEICER 375
            |||..|||.|.:|:||.:|:|.||||:|:.|..|.:|||.||:|..|:. ||..|:||.|..|.:
Zfish   122 YTCTRCGKCFSQSSNLNQHMRIHTGEKPFTCTQCGKSFSRSSHLNEHMM-IHTGEKPFTCTQCGK 185

  Fly   376 CFGQQTNLDRHLKKHESD--------AVSLSALSGVSERMHCIRRFCENP--------------- 417
            .||:..:|..|:..|..:        ..|.|..|.:::......|  |||               
Zfish   186 SFGRNLDLKIHMMIHTGENPFRCTHCGKSFSQSSSLNQHKKIHTR--ENPFTCTQCGKSFNRSSS 248

  Fly   418 --------TEESYF----------------EEIRSFMGK----VTQQQQQQQQQQQHDQQQQQHQ 454
                    |.|..|                |.:|...|:    .||..:...|....::..:.|.
Zfish   249 LNNHKTIHTREKPFSCTQCGKTFNYSSHLYEHMRIHTGEKPFTCTQCGKNFNQSSNLNRHMRIHT 313

  Fly   455 S----TATSASSS--CSSSRDTPTSSH 475
            .    |.|....|  ||||.:....||
Zfish   314 RENPFTCTQCGKSFICSSSLNLHIMSH 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 27/51 (53%)
zf-C2H2 311..333 CDD:278523 12/21 (57%)
C2H2 Zn finger 313..333 CDD:275368 10/19 (53%)
zf-H2C2_2 325..349 CDD:290200 12/23 (52%)
C2H2 Zn finger 341..362 CDD:275368 9/20 (45%)
zf-H2C2_2 353..377 CDD:290200 9/23 (39%)
zf-C2H2 368..390 CDD:278523 7/21 (33%)
C2H2 Zn finger 370..390 CDD:275368 6/19 (32%)
LOC110437813XP_021331303.1 C2H2 Zn finger 68..88 CDD:275368
COG5048 <83..338 CDD:227381 62/218 (28%)
C2H2 Zn finger 96..116 CDD:275368
C2H2 Zn finger 124..144 CDD:275368 10/19 (53%)
C2H2 Zn finger 152..172 CDD:275368 9/20 (45%)
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
C2H2 Zn finger 208..228 CDD:275368 3/19 (16%)
C2H2 Zn finger 236..256 CDD:275368 0/19 (0%)
C2H2 Zn finger 264..284 CDD:275368 2/19 (11%)
C2H2 Zn finger 292..312 CDD:275368 3/19 (16%)
C2H2 Zn finger 320..340 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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