DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and LOC108183935

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_017211249.1 Gene:LOC108183935 / 108183935 -ID:- Length:358 Species:Danio rerio


Alignment Length:208 Identity:58/208 - (27%)
Similarity:88/208 - (42%) Gaps:52/208 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   268 PKLSPVLPHPQLQDYQTRRKNKARTAATGG-------NATPNLPQRNKDR-YTCKFCGKVFPRSA 324
            |||.     ..::|:   .:.||.|....|       |.|.::.....:| |||:.|||.|.::.
Zfish    90 PKLD-----VHIRDH---TREKAYTCKQCGKSFYNTRNLTVHMRIHTGERPYTCQQCGKSFHKTG 146

  Fly   325 NLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKK 389
            |||.|:|.||||:||.|:.|.:||..:.||..|:| ||..|:|:.|..|.:.:.|.:||:.|::.
Zfish   147 NLTVHMRIHTGERPYTCQQCGKSFQTTGNLTVHMR-IHTGEKPYSCPQCGKSYNQNSNLEVHMRT 210

  Fly   390 HESDAVSLSALSGVSERMHCIRRFCENPTEESYFEEIRSFMGKVTQQQQQQQQQQQHDQQQQQHQ 454
            |...                                 |:|:  .||..:...|:|..|...:.|.
Zfish   211 HNGG---------------------------------RTFV--CTQCGKSFAQKQNLDLHMRIHT 240

  Fly   455 STATSASSSCSSS 467
            .......:.|..|
Zfish   241 GEKPYTCTECGKS 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 29/63 (46%)
zf-C2H2 311..333 CDD:278523 12/21 (57%)
C2H2 Zn finger 313..333 CDD:275368 10/19 (53%)
zf-H2C2_2 325..349 CDD:290200 14/23 (61%)
C2H2 Zn finger 341..362 CDD:275368 8/20 (40%)
zf-H2C2_2 353..377 CDD:290200 10/23 (43%)
zf-C2H2 368..390 CDD:278523 6/21 (29%)
C2H2 Zn finger 370..390 CDD:275368 6/19 (32%)
LOC108183935XP_017211249.1 C2H2 Zn finger 79..99 CDD:275368 3/13 (23%)
C2H2 Zn finger 107..127 CDD:275368 3/19 (16%)
zf-H2C2_2 119..144 CDD:316026 10/24 (42%)
C2H2 Zn finger 135..155 CDD:275368 10/19 (53%)
zf-H2C2_2 147..170 CDD:316026 13/22 (59%)
C2H2 Zn finger 163..183 CDD:275368 8/20 (40%)
COG5048 <187..346 CDD:227381 18/102 (18%)
C2H2 Zn finger 191..211 CDD:275368 6/19 (32%)
C2H2 Zn finger 219..239 CDD:275368 5/19 (26%)
C2H2 Zn finger 247..267 CDD:275368 2/7 (29%)
C2H2 Zn finger 275..295 CDD:275368
C2H2 Zn finger 303..323 CDD:275368
C2H2 Zn finger 330..350 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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