DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and LOC103691005

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_038956093.1 Gene:LOC103691005 / 103691005 RGDID:9163837 Length:764 Species:Rattus norvegicus


Alignment Length:413 Identity:97/413 - (23%)
Similarity:136/413 - (32%) Gaps:143/413 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 TSYISHVPYDLASSASVAATSSSSTSPTTTSATTTGRLQHQHSHQQHQTLNHHAKGKRRSSFDQP 93
            |.||...|:.........:||||.|             .||..|.:.:....:...|   ||.|.
  Rat   198 TVYIKEKPHQCGKCGKCFSTSSSLT-------------VHQRIHTREKPYKCNICDK---SFTQC 246

  Fly    94 LDLRLAHKRKTDLVDQGPMEDENSNLIMFASELAVAQQK----EKELNNNHIAASLADLGFDMSR 154
            ..|::..:|.|........|.|.|.:.:.|.:   :.||    ||.........|.|......:.
  Rat   247 THLKIHQRRHTGEKPYKCKECEKSFVQLSALK---SHQKLHTGEKPYKCKECDKSFAHYPNFRTH 308

  Fly   155 KMLRALREGGAGGGGGGGGGGGGGGGPPNAPPLTPPQCSIP----AVHPTLLEAMTKNLPLQYRN 215
            :.:....|                            .||.|    ..|.  |....|:    || 
  Rat   309 QKIHTSEE----------------------------HCSCPECGREFHQ--LSHFRKH----YR- 338

  Fly   216 VFAGVLPGKVNSPAASSSPTGADFPFRHPLKKCELTWPPPTEQLQLELPHPNPKLSPVLPHPQLQ 280
            :..|..|.|.|....|         |.|   ...|.|...|.             ||.:.|    
  Rat   339 LHTGEKPYKCNECGRS---------FTH---YASLRWHQKTH-------------SPEMHH---- 374

  Fly   281 DYQTRRKNKARTAATGGNATPNLPQRNKDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCE 345
                                           .||.|||.|...::|.||.|.||||:||||:.|:
  Rat   375 -------------------------------ECKECGKAFIELSHLKRHYRIHTGEKPYKCEICD 408

  Fly   346 RSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKHESDAVSLSALSGVSERMH-- 408
            :||:.::.|:.| :.||..|:|:||..|::.|...::|.||...|            ..||.:  
  Rat   409 KSFTTTTTLKTH-QKIHTGEKPYKCRECDKSFIHSSHLRRHQSIH------------TGERPYKC 460

  Fly   409 --CIRRFCENPT----EESYFEE 425
              |.:.|.||.|    |:|:.||
  Rat   461 KECDKSFRENSTLREHEKSHTEE 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 24/62 (39%)
zf-C2H2 311..333 CDD:278523 10/21 (48%)
C2H2 Zn finger 313..333 CDD:275368 10/19 (53%)
zf-H2C2_2 325..349 CDD:290200 14/23 (61%)
C2H2 Zn finger 341..362 CDD:275368 6/20 (30%)
zf-H2C2_2 353..377 CDD:290200 9/23 (39%)
zf-C2H2 368..390 CDD:278523 7/21 (33%)
C2H2 Zn finger 370..390 CDD:275368 6/19 (32%)
LOC103691005XP_038956093.1 KRAB 33..73 CDD:396083
COG5048 140..526 CDD:227381 97/413 (23%)
C2H2 Zn finger 208..228 CDD:275368 7/32 (22%)
C2H2 Zn finger 236..256 CDD:275368 5/22 (23%)
C2H2 Zn finger 264..284 CDD:275368 6/22 (27%)
C2H2 Zn finger 292..312 CDD:275368 2/19 (11%)
C2H2 Zn finger 348..368 CDD:275368 6/31 (19%)
COG5048 374..734 CDD:227381 47/158 (30%)
C2H2 Zn finger 376..396 CDD:275368 10/19 (53%)
C2H2 Zn finger 404..424 CDD:275368 6/20 (30%)
C2H2 Zn finger 432..452 CDD:275368 6/19 (32%)
C2H2 Zn finger 460..480 CDD:275368 6/19 (32%)
C2H2 Zn finger 488..509 CDD:275368
C2H2 Zn finger 517..537 CDD:275368
C2H2 Zn finger 545..565 CDD:275368
C2H2 Zn finger 573..593 CDD:275368
C2H2 Zn finger 601..621 CDD:275368
C2H2 Zn finger 629..649 CDD:275368
C2H2 Zn finger 657..677 CDD:275368
C2H2 Zn finger 685..705 CDD:275368
C2H2 Zn finger 713..733 CDD:275368
C2H2 Zn finger 741..761 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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