DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and LOC102548695

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_038949420.1 Gene:LOC102548695 / 102548695 RGDID:7529325 Length:682 Species:Rattus norvegicus


Alignment Length:124 Identity:44/124 - (35%)
Similarity:64/124 - (51%) Gaps:21/124 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 YTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEICER 375
            |.|:.|||.|.:::||..|.|.||||:||||..|.:||..||:|..|.| ||..|:|::||.|::
  Rat   446 YKCEECGKGFSQASNLLAHQRGHTGEKPYKCNTCGKSFRRSSDLNVHCR-IHTGEKPYRCEKCDK 509

  Fly   376 CFGQQTNLDRHLKKHESD----------AVSLSALSGVSERMH----------CIRRFC 414
            .|.|.::|..|.:.|..:          ..|:.:.....:|.|          |.:.||
  Rat   510 VFSQFSSLQVHQRVHTGEKPYQCSECGKGFSVGSQLQAHQRCHTGERPYQCEECGKGFC 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 27/51 (53%)
zf-C2H2 311..333 CDD:278523 10/21 (48%)
C2H2 Zn finger 313..333 CDD:275368 9/19 (47%)
zf-H2C2_2 325..349 CDD:290200 14/23 (61%)
C2H2 Zn finger 341..362 CDD:275368 9/20 (45%)
zf-H2C2_2 353..377 CDD:290200 10/23 (43%)
zf-C2H2 368..390 CDD:278523 7/21 (33%)
C2H2 Zn finger 370..390 CDD:275368 7/19 (37%)
LOC102548695XP_038949420.1 KRAB 48..106 CDD:214630
C2H2 Zn finger 225..242 CDD:275370
COG5048 302..664 CDD:227381 44/124 (35%)
C2H2 Zn finger 308..328 CDD:275368
C2H2 Zn finger 336..356 CDD:275368
C2H2 Zn finger 364..384 CDD:275368
C2H2 Zn finger 392..412 CDD:275368
C2H2 Zn finger 420..440 CDD:275368
C2H2 Zn finger 448..468 CDD:275368 9/19 (47%)
C2H2 Zn finger 476..496 CDD:275368 9/20 (45%)
C2H2 Zn finger 504..524 CDD:275368 7/19 (37%)
C2H2 Zn finger 532..552 CDD:275368 2/19 (11%)
C2H2 Zn finger 560..580 CDD:275368 3/9 (33%)
C2H2 Zn finger 588..608 CDD:275368
C2H2 Zn finger 616..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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