DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10348 and LOC100535385

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_003200145.1 Gene:LOC100535385 / 100535385 -ID:- Length:361 Species:Danio rerio


Alignment Length:90 Identity:40/90 - (44%)
Similarity:55/90 - (61%) Gaps:7/90 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 NKDRYT------CKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 365
            ::.|:|      |..|||.|..|..|..|.:.|:||:||||..|::.|:.|.:|:.|:| :|..|
Zfish   267 HQKRHTGERDQQCAECGKGFTTSKRLKEHQKIHSGEKPYKCSQCDKCFTQSGSLKCHLR-VHTGE 330

  Fly   366 RPFKCEICERCFGQQTNLDRHLKKH 390
            |||||..|.|.|.|.|||..|:||:
Zfish   331 RPFKCPSCGRNFSQLTNLITHVKKY 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 23/61 (38%)
zf-C2H2 311..333 CDD:278523 9/27 (33%)
C2H2 Zn finger 313..333 CDD:275368 8/19 (42%)
zf-H2C2_2 325..349 CDD:290200 10/23 (43%)
C2H2 Zn finger 341..362 CDD:275368 7/20 (35%)
zf-H2C2_2 353..377 CDD:290200 12/23 (52%)
zf-C2H2 368..390 CDD:278523 12/21 (57%)
C2H2 Zn finger 370..390 CDD:275368 10/19 (53%)
LOC100535385XP_003200145.1 COG5048 69..>355 CDD:227381 39/88 (44%)
C2H2 Zn finger 83..103 CDD:275368
zf-H2C2_2 95..120 CDD:290200
C2H2 Zn finger 111..131 CDD:275368
zf-H2C2_2 123..147 CDD:290200
C2H2 Zn finger 139..159 CDD:275368
C2H2 Zn finger 167..187 CDD:275368
C2H2 Zn finger 195..215 CDD:275368
C2H2 Zn finger 223..243 CDD:275368
zf-H2C2_2 236..258 CDD:290200
C2H2 Zn finger 251..271 CDD:275368 0/3 (0%)
C2H2 Zn finger 279..299 CDD:275368 8/19 (42%)
zf-H2C2_2 292..316 CDD:290200 11/23 (48%)
C2H2 Zn finger 307..327 CDD:275368 7/20 (35%)
zf-H2C2_2 319..344 CDD:290200 13/25 (52%)
C2H2 Zn finger 335..353 CDD:275368 9/17 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.