DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and LOC100496074

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_002938649.3 Gene:LOC100496074 / 100496074 -ID:- Length:385 Species:Xenopus tropicalis


Alignment Length:344 Identity:89/344 - (25%)
Similarity:145/344 - (42%) Gaps:79/344 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 PPLTPPQ--CS----IPAVHPTLL-----EAMT---KNLPLQYRNVFAGVLPGKVNSPAASS--S 233
            |.||..:  |:    .|:.||.:|     :|.|   ..|.||.::.....: .:.|||.||:  .
 Frog    74 PDLTKSKNCCNFTHGFPSHHPDILLRVKQQAQTLLSDQLELQEKSCRTSSV-DENNSPLASTHKE 137

  Fly   234 PTGA----------DF--------PFRHPLKKCELTWPPPTEQLQLELPHPNPKLSPVLPHPQLQ 280
            .||:          |:        .....:|:..|.|....|:.:   |...||..|        
 Frog   138 STGSSKLAGDRLAGDYLEDDNNEDQLPEKVKENILCWEDIFEKNE---PKSIPKEGP-------- 191

  Fly   281 DYQTRRKNKARTAATGGNATPNLPQRNKDR-YTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYC 344
            :...|.:..|.|.....:..|::|   |:| |.|..|||.|..::.|.||:|.||||:|:.|.:|
 Frog   192 NESERDEGLACTNPVKMDQKPSVP---KERLYICSVCGKSFGGNSLLVRHMRIHTGEKPFACNHC 253

  Fly   345 ERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKHESDAVSLSALSGVSER--- 406
            ::||:..|.|.||:|. |..|:|:.|.:|.:||.|.:::..|::.|            ..||   
 Frog   254 DKSFNDKSYLLRHLRT-HTGEKPYSCSVCLKCFSQNSSVIAHMRIH------------TGERPFQ 305

  Fly   407 -MHCIRRFCENPTEESYF-EEIRSFMG----KVTQQQQQQQQQQQHDQQQQQHQSTATSASSSCS 465
             ..|.:||    :::||| ..:|:..|    |.:..::...|........:.|........|.|.
 Frog   306 CPECEKRF----SDKSYFVRHMRTHSGEKPYKCSHCEKCFSQTSSLTSHMRIHTGEKPYKCSDCG 366

  Fly   466 S--SRDTPTSSHEEADHAP 482
            .  |:::..:.|:.. |.|
 Frog   367 KCFSQNSSLALHKRL-HKP 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 28/63 (44%)
zf-C2H2 311..333 CDD:278523 10/21 (48%)
C2H2 Zn finger 313..333 CDD:275368 9/19 (47%)
zf-H2C2_2 325..349 CDD:290200 12/23 (52%)
C2H2 Zn finger 341..362 CDD:275368 9/20 (45%)
zf-H2C2_2 353..377 CDD:290200 9/23 (39%)
zf-C2H2 368..390 CDD:278523 6/21 (29%)
C2H2 Zn finger 370..390 CDD:275368 6/19 (32%)
LOC100496074XP_002938649.3 KRAB 10..66 CDD:214630
COG5048 <203..373 CDD:227381 55/189 (29%)
C2H2 Zn finger 222..242 CDD:275368 9/19 (47%)
C2H2 Zn finger 250..270 CDD:275368 9/20 (45%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 7/23 (30%)
C2H2 Zn finger 334..354 CDD:275368 1/19 (5%)
C2H2 Zn finger 362..382 CDD:275368 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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