DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and LOC100495895

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_031759495.1 Gene:LOC100495895 / 100495895 -ID:- Length:385 Species:Xenopus tropicalis


Alignment Length:96 Identity:41/96 - (42%)
Similarity:59/96 - (61%) Gaps:2/96 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 RNKDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKC 370
            |.:.|||||.|||.|.:|:.|..|.|.||||:|:.|..|.:.||.:|:|..|.| :|..|||:.|
 Frog   290 RGEKRYTCKECGKSFSQSSYLVIHQRIHTGEKPFVCNECGKCFSRNSSLVTHQR-VHTGERPYTC 353

  Fly   371 EICERCFGQQTNLDRHLKKHESDA-VSLSAL 400
            ..|.:.|.|.::|..|.:.|..|: ::|.|:
 Frog   354 AECGKSFRQSSHLLIHQRTHTPDSHLALRAM 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 27/56 (48%)
zf-C2H2 311..333 CDD:278523 12/21 (57%)
C2H2 Zn finger 313..333 CDD:275368 10/19 (53%)
zf-H2C2_2 325..349 CDD:290200 10/23 (43%)
C2H2 Zn finger 341..362 CDD:275368 8/20 (40%)
zf-H2C2_2 353..377 CDD:290200 9/23 (39%)
zf-C2H2 368..390 CDD:278523 6/21 (29%)
C2H2 Zn finger 370..390 CDD:275368 6/19 (32%)
LOC100495895XP_031759495.1 C2H2 Zn finger 185..205 CDD:275368
zf-C2H2 211..233 CDD:395048
C2H2 Zn finger 213..233 CDD:275368
COG5048 <237..374 CDD:227381 37/84 (44%)
C2H2 Zn finger 241..261 CDD:275368
C2H2 Zn finger 269..289 CDD:275368
C2H2 Zn finger 297..317 CDD:275368 10/19 (53%)
C2H2 Zn finger 325..345 CDD:275368 8/20 (40%)
C2H2 Zn finger 353..373 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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