Sequence 1: | NP_001286059.1 | Gene: | CG10348 / 35132 | FlyBaseID: | FBgn0032707 | Length: | 540 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038967290.1 | Gene: | Prdm16 / 100366024 | RGDID: | 2324431 | Length: | 1276 | Species: | Rattus norvegicus |
Alignment Length: | 564 | Identity: | 172/564 - (30%) |
---|---|---|---|
Similarity: | 228/564 - (40%) | Gaps: | 164/564 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 EKDHSPRKMLPSPKQGCVYPALGLIPTSYISHVPYDLASSASVAATSSSSTSPTTTSATTTGRLQ 67
Fly 68 HQHSHQQHQTLNHHAKGKRRS----------SFDQPLDLRLAHKR--------KTDLVDQGPMED 114
Fly 115 ENSNLIMFASELAVAQQK--EKELNNNHIAASLADLGFDMSRKMLRALREGGAGGGGGGGGGGGG 177
Fly 178 GGGPPNAPPLTPPQCSIPAVHPTLLEAMTKNLPLQYRNVFAGVLPGKVNSPAASSSPTGADFPFR 242
Fly 243 HPLKKCELTWPPPTEQLQLELPHPNPKLSPVLPHPQLQDYQT---RRKNKARTAATGGNATPNLP 304
Fly 305 ------------------QRNKDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSIS 351
Fly 352 SNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKHESDAVSLSALSGVSERMHCIRRFCEN 416
Fly 417 PT------------EESYFEEIRSFMGKVTQQQQQQQQQQQHDQQQQQHQSTATSASSSCSSSRD 469
Fly 470 TPTSSHEEA-----DHAPATSTADTAAPSSSRD---QEEEDSQP 505 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG10348 | NP_001286059.1 | COG5048 | 300..>363 | CDD:227381 | 50/80 (63%) |
zf-C2H2 | 311..333 | CDD:278523 | 18/21 (86%) | ||
C2H2 Zn finger | 313..333 | CDD:275368 | 16/19 (84%) | ||
zf-H2C2_2 | 325..349 | CDD:290200 | 21/23 (91%) | ||
C2H2 Zn finger | 341..362 | CDD:275368 | 19/20 (95%) | ||
zf-H2C2_2 | 353..377 | CDD:290200 | 19/23 (83%) | ||
zf-C2H2 | 368..390 | CDD:278523 | 18/21 (86%) | ||
C2H2 Zn finger | 370..390 | CDD:275368 | 16/19 (84%) | ||
Prdm16 | XP_038967290.1 | PR-SET_PRDM16 | 61..222 | CDD:380990 | |
C2H2 Zn finger | 232..252 | CDD:275368 | |||
zf-C2H2 | 282..304 | CDD:395048 | |||
C2H2 Zn finger | 284..304 | CDD:275368 | |||
zf-H2C2_2 | 296..320 | CDD:404364 | |||
zf-C2H2 | 310..332 | CDD:395048 | |||
C2H2 Zn finger | 312..332 | CDD:275368 | |||
zf-C2H2 | 338..359 | CDD:395048 | |||
C2H2 Zn finger | 340..358 | CDD:275368 | |||
zf-C2H2 | 367..389 | CDD:395048 | |||
C2H2 Zn finger | 369..389 | CDD:275368 | |||
zf-C2H2 | 395..417 | CDD:395048 | |||
C2H2 Zn finger | 397..417 | CDD:275368 | |||
C2H2 Zn finger | 426..444 | CDD:275368 | |||
zf-C2H2 | 952..974 | CDD:395048 | 18/21 (86%) | ||
C2H2 Zn finger | 954..974 | CDD:275368 | 16/19 (84%) | ||
zf-H2C2_2 | 966..990 | CDD:404364 | 21/23 (91%) | ||
SUF4-like | 982..>1016 | CDD:411020 | 29/33 (88%) | ||
C2H2 Zn finger | 982..1008 | CDD:411020 | 24/25 (96%) | ||
C2H2 Zn finger | 982..1003 | CDD:275368 | 19/20 (95%) | ||
zf-C2H2 | 1009..1031 | CDD:395048 | 18/21 (86%) | ||
C2H2 Zn finger | 1011..1031 | CDD:275368 | 16/19 (84%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 54 | 1.000 | Domainoid score | I10947 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D254483at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002720 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24393 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.020 |