DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and Zfp617

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_006253017.1 Gene:Zfp617 / 100361660 RGDID:2319713 Length:423 Species:Rattus norvegicus


Alignment Length:267 Identity:74/267 - (27%)
Similarity:110/267 - (41%) Gaps:47/267 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 KKCELTWPPPTEQ--LQLELPHPNPKLSPVLPHPQLQDYQTRRKNKARTAATGGNATPNLPQRNK 308
            :|||||...|..:  :|.:||..:..:...|..|      |...:|.|..        :..:..|
  Rat    70 RKCELTNSGPCAETVVQSKLPECHTAIQSSLKRP------TTSNSKYRPC--------DYQKYVK 120

  Fly   309 DRYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEIC 373
            ..|.||.|||||....:|.:|.:||:||:||||||||::||....:.||:.. ||.:| :||.:|
  Rat   121 KYYECKMCGKVFMCLGSLKKHKKTHSGEKPYKCKYCEKAFSYRYCVDRHMLT-HNTDR-YKCRVC 183

  Fly   374 ERCFGQQTNLDRHLKKHE---------------SDAVSLSALSGVSERM----HCIRRF---CEN 416
            .:.|.....|..|...|.               |.::.|......:|::    ||.:.|   |  
  Rat   184 RKTFSNAIALREHKAIHSGEIPECKECGRMFWTSSSLDLHKRLHTTEKLYECKHCGKAFTGYC-- 246

  Fly   417 PTEESYFEEIRSFMGKVTQQQQQQQQQQQHDQQQQQHQSTATSASS-SCSSSRDTPTSSHEEADH 480
                |:....|:..|:...:.:|..:..:|....|.|:...|.... .|.....|.||.|....|
  Rat   247 ----SFQLHKRTHTGEKPYECKQCGKTFRHSSHVQAHKRIHTGEKPYECMQCGKTFTSGHCARRH 307

  Fly   481 APATSTA 487
            ....|.|
  Rat   308 LGTHSGA 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 27/62 (44%)
zf-C2H2 311..333 CDD:278523 10/21 (48%)
C2H2 Zn finger 313..333 CDD:275368 9/19 (47%)
zf-H2C2_2 325..349 CDD:290200 14/23 (61%)
C2H2 Zn finger 341..362 CDD:275368 9/20 (45%)
zf-H2C2_2 353..377 CDD:290200 8/23 (35%)
zf-C2H2 368..390 CDD:278523 6/21 (29%)
C2H2 Zn finger 370..390 CDD:275368 5/19 (26%)
Zfp617XP_006253017.1 KRAB 4..>44 CDD:214630
KRAB 4..43 CDD:279668
C2H2 Zn finger 125..145 CDD:275368 9/19 (47%)
zf-H2C2_2 137..162 CDD:290200 15/24 (63%)
COG5048 <149..307 CDD:227381 42/165 (25%)
C2H2 Zn finger 153..173 CDD:275368 9/20 (45%)
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
C2H2 Zn finger 207..227 CDD:275368 2/19 (11%)
C2H2 Zn finger 235..255 CDD:275368 6/25 (24%)
zf-H2C2_2 247..272 CDD:290200 4/24 (17%)
COG5048 <259..418 CDD:227381 13/56 (23%)
C2H2 Zn finger 263..283 CDD:275368 4/19 (21%)
zf-H2C2_2 275..300 CDD:290200 5/24 (21%)
C2H2 Zn finger 291..311 CDD:275368 6/19 (32%)
C2H2 Zn finger 319..339 CDD:275368
C2H2 Zn finger 347..367 CDD:275368
zf-H2C2_2 359..384 CDD:290200
C2H2 Zn finger 375..395 CDD:275368
C2H2 Zn finger 402..422 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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